Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele06g0493 ATGGAAGAAGCGACGGCACTGGTGGACAAAGGAGAGGAGGCTCTGTATTTGCCTCCTGGTTTCAGATTTCATCCCACCGACGAGGAGATCATCACTTGTTATCTTACGGAGAAGGTCTTGAACAGCAGTTTCAGTGCAACTGCCATCGGTGAAGCTGATTTGAACAAGTGCGAGCCTTGGGATCTCCCCAAGAGAGCGAGGATAGGGGAGAAAGAGTGGTACTTCTTCTGTCAGAGAGACAGGAAGTATCCGACGGGGACGAGAACAAATAGGGCGACGGAGTCTGGGTACTGGAAGGCCACCGGAAAAGATAGGGAGATTTACAGAGGCAAAGACAATCTCGTCGGCATGAAGAAGACCCTCGTCTTCTACCGAGGGAGAGCTCCTAAAGGCGAGAAAACTGGCTGGGTCATGCATGAATTCCGATTGGAAGGACAATTCGCCACTTACAACCTCCCCAAGGCCGCTAAGGATGAATGGGCTGTGTGCAAGATTTTCCACAAGAACACAGACGTCAAAAAGACCCCTATTCCTGAGCTTCTAAGGATCAACTCCCTCGGCGATCATCTGCTGGATTTCTCTCCCTCGCTTCCGCCTCTCATGGATCCAGCTTGTTTCAGTAACTCCGATCAACCCGGCTACAGTGGTGGCGATGAATTCAAGGGGACCTACCAGCACCCCTCATCGGACGGCTATTATCTCCCCAACTTCGCCGGCAACAACCATCTTAATAACAATCAGACGGCGATGAAGGTGGAACAAGACTGCAGAGCCAGAAACTATGAGATGATGATCCCCACTTACTGCTCCGGCGCCAATCCTCTCTCACAAACTCAGATGGGATTAATCCAGAATCCGAGTTTGTGCCTTGAGCAGAATGTTGTGTCGGATTACAGTAACAGACATGTCGTCGGAGGTGGAGTGAAGAATGAAAACTTGTCGTGGGGAATGGATAAACAGTACGATATGGAGCATTCGATGGTGAGTGTGTCGCAGGATACCGGCGTCAGCAATGACAGAAACGCCGAAACTTGCTCGGCGGTATCCGCGAGGCGAGACATCATTGGAAGGAATAAGGCAGCGTACGAGGATGATTTCATCCAGCAGCCCCCTTCACTTGGTCCCCTTTCAGATTTGGATTGCCTCTGGGATGACTACTGA 1161 0.509 MEEATALVDKGEEALYLPPGFRFHPTDEEIITCYLTEKVLNSSFSATAIGEADLNKCEPWDLPKRARIGEKEWYFFCQRDRKYPTGTRTNRATESGYWKATGKDREIYRGKDNLVGMKKTLVFYRGRAPKGEKTGWVMHEFRLEGQFATYNLPKAAKDEWAVCKIFHKNTDVKKTPIPELLRINSLGDHLLDFSPSLPPLMDPACFSNSDQPGYSGGDEFKGTYQHPSSDGYYLPNFAGNNHLNNNQTAMKVEQDCRARNYEMMIPTYCSGANPLSQTQMGLIQNPSLCLEQNVVSDYSNRHVVGGGVKNENLSWGMDKQYDMEHSMVSVSQDTGVSNDRNAETCSAVSARRDIIGRNKAAYEDDFIQQPPSLGPLSDLDCLWDDY 386
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele06g0493 386 Gene3D NAC domain 26 173 IPR036093 GO:0003677|GO:0006355
Lele06g0493 386 Pfam No apical meristem (NAM) protein 18 143 IPR003441 GO:0003677|GO:0006355
Lele06g0493 386 SUPERFAMILY NAC domain 13 169 IPR036093 GO:0003677|GO:0006355
Lele06g0493 386 FunFam NAC domain-containing protein 100-like 26 172 - -
Lele06g0493 386 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 16 262 - -
Lele06g0493 386 ProSiteProfiles NAC domain profile. 17 168 IPR003441 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele06g0493 Lele-ChrLele06 3006097 3007571 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele06g0493 1 283 NAC Transcription Factor Family AT5G18270 54.194 1.18e-112 330
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Lele06g0493 NAM 4.3e-39 No_clan