Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele06g0491 ATGCTTGATCAGTTTATGACCTCAATGAATTTGCTCCATGAGATAGTAACAGAACTTGTATTTCGCATTTGGGTGGGCATACGTAAACAACTGGCACAATACATGGGACCAATTCTATGTGTACTGGATTTGCCCCTTCATTGGTGCAATAGTAGCTGCCTGGGCGTTTCGAATTTTGTGTCCCCCACCAGCACCAGTAGAGAAACAGAAGAAAGCCTGAAGAGGCCTTGCTGGAAGATCTGTTGGACGACGTTTTCAGATTATTCAATTCACAGACTAATCGATCATTTTCCATCACTTTGTAGAAAACCTCAGGACTTCGAGCTGGATCCGCTACAAGAGCCCAAGCAGTTGAAGGGTCCCCCTGCTGCTGGGAACGGTCAGATCCGGTACCGATCTCCATCTGCGGCTGATCTTTCTGAAGGGCAGGGAAACAATTCTCCGCCGTCCTATTCCGTCGATCAACACCTGCCCGAATTCGAATCTAGCAAAATGCTCAAGCGCCCTGTTCGGCAAGAGTCTTTCTCCGACAAGATCTACAGATTCCGAGGGGTTTTGTTAGTGATCTCTGTTCCACTCCTTCTCATTACTTTTGTACTCTACTTAATGCCTGCAAGCTCTTCCAACGAACTCATTCAGGACTATGCTCTCACTCATCGTAAAATTAACCCCGATCAGAAATTCTCTGATTCCTATGCTGTTATTTTCGACGCTGGTAGTTCTGGGAGCCGTGTACATGTCTTCCATTTTGACCACAACCTAGATCTTGTTCACATTGGCCAAGATCTAGAGCTTTTTGAGCAGTTAAAACCGGGTTTGAGTGCATACGCTCAGAATCCCCAGGGGGCCGCGGGTTCCCTCATTTCCCTTTTAGACAAAGCGGAAAGTGTTGTTCCCCAGAACTTACGCCCAAAGACGCCCGTTAAAGTTGGGGCAACGGCAGGTTTGAGGGCCTTGGAAGGAGATGCTTCTGATAGGATCTTGCAAGCAGTTAGGGATTTGCTTAAGCACAGAAGCACCCTAAAATCTGAGGCTGGTGCTGTCACAGTACTGGATGGAACCCAAGAAGGTGCTTATCAATGGGTGACTATTAACTATCTACTGGGGAACCTGGGACAACCATATTCAAAGACAGTTGGAGTAGTTGATCTTGGGGGTGGATCTGTTCAAATGGCATATGCCATCTCAGACAAAGATGCTGCGAAGTCTCCCAAAGTAGCAGATGGAGCGGATCCATACATTAAAGAGATGTTCTTAAGGGGAAGGAAGTATTACCTCTATGTTCACAGCTACTTGAAATATGGATTGCTGGCAGCTCGTGCAGAGATTTTACAGGTTTCCGAAGATTCTGACAATCCTTGTATCTTATCTGGCTTTGATGGGTCTTACAACTATGGAGGAAAGTCGTTCAAGGCCTCAGCCTCCCCTACGGGAAGCTTGAATGAATGTAAAAGTGTAGTTCTCAAGGCTCTCAAAGTTAATGAGTCAACATGCACGCATATGAAGTGCACTTTTGGGGGAATATGGAATGGTGGAGGAGGAGATGGTCAGAAAAATCTTTTTGTCGCCTCATTTTTCTTTGATCGGGCTGCTGAGGCTGGTATTGCTGATCCAAACTTACCCGTGGCCAAAGTTCATCCTGTGGATTTTGAGGATGCAGCGAAGCGAGCTTGTGAAACTAAACTTGAGGATGCTAAATCCATTTATCAAAGCGTCGGGGAGGGGAATCTTCCGTATATGTGCATGGATCTTGTATATCAGTATACATTGCTTGTTGATGGATTTGGCCTAGATCCCTGGCAAGAGATTACACTGGTGAAGAAAGTAAAATATCAGGATTCTCTCGTTGAGGCAGCATGGCCATTAGGCAGCGCCATAGAAGCCGGTACTTGGACCGTGGCCCAAATTTTAATTGTCATTGAAGGGCTCCTAGGTCCTAACCTGGGACCTGTCACTACAGTGAGTTGCCCACGTCTTGATTTCAATCCCGCGCCGGCGAAGTCTGAGGTTCGTTTCTTCGAAGCATCCCACATGGCTATTGTTCTTATTTGCACGGCACTACATATCTCTGCACATATTATATCTAATCTAACCGTTTTCTCTGTTGTGCTACTCATCCGACAGAATTTATACTCTGTTAATCACAGTCGTGTATTTGAGCAGCTCCCGACCACCGCTTTCAATTTCTTGAAGCCTTCAGTGCCTTCCACTTTTCTGGCTCCACCACGATTAGGTTTCTCAGTCCTGTTTTCCTCTTCATCCTCGACCACAAAAGTTGGAGTGTCAACTGATGCCCCAACTCTAGGTTTTGATGAGACTTCGGGTGATGATGAGGTGGAAGTGGTGGATGGCCTTGACGACAATAATCATACCCATCTTAGTCAGTTACACTTAAGGGATGATGATCTTGGCCAAGATGTTAAAACCATATTGGATATATTACGTGGAGCAGGTTGTAGACCATCTGATATGAAATGTAAGCTCGAGCATTGCAATATTACTGTATCATCAGAGTTGGTTGTAGAGGTTCTTTCAAGAATTCGGAATGATTGGGAAGCGGCTTTCACTTTTTTCCTGTGGGCAGGCAAGCAACAGAATTATGTTCATTCTGTTCGCGAGTACCACTCCATGATTTATATCCTTGGTAAAATGAGGAAGTTTGATACTGCTTGGACCTTAATTGAGGAAATGAGACGAGGTAGTTCTGGTCCATCTCTTGTCACCCCTCAAACTCTCTTGATTATGATTAGGAGATACTGTGCTGTTCATGATGTTGGAAAGGCTATAAGTACTTTCTATGCATATAAACGGTTCAACCTTCAAGTTGGAATGGATGAATTTCAAGGCCTTCTTTCTGCCCTTTGTCGTTACAAGAATGTAGAAGATGCTGAGCATCTTCTTTTCTGCAACAAAAATATATTCCCATTCAACACCAAAAGCTTCAACATTATTCTAAATGGATGGTGTAATTTGATTGTTAGCCCACGTCATGCAGAGAGAATTTGGCAGGAGATGGGCAAGAGAGGAATCAAATATGATGTTGTCTCCTATGCAAGCATCATGTCTTGCTATTCAAAGGCTTCTAAACTTTACAAGGTATTCAGGTTGTTTGACCAGATGAAGAAAACAAAGATCGCTCCAGATAGGAAAGTTTATAATTCGGTCATTCATGCTCTTGCAAAGGGTAGGTTTGTGAAAGAAGCTGTCAATCTCCTGAGAACAATGGAAGATGCCAACATTTCTCCGGATACTGTTACTTACAACTCACTAATCAGTCCTCTATGTAAAGCCCACAAAATTGGTGAAGCTAAAGAAATTTTAGACGAGATGGTGCAGCGGGGTCTGTCCCCTACAATTCGGACTTATCATGCTTTCTTCCGTATCCTAAGGACCAAGGAAGAAATATTTGAGCTTCTAGGCAAGATGAGGGAATGTGGCTGCTACCCAACTACTGAGACTTATCTGATGTTGATAAGAAAGTTCAGTCGATGGCAACAGCTTGATATTGTCTTTAAGCTATGGAGTGAGATGAGTGAGAGTGGAGTCAATCGTAGCTCGTACATTGTACTGATTCATGGGCTATTTCTGAATGGAAAGCTGGAGGAAGCATACAAATATTACAATGAGATGCAGGAGAAAGGATTCCCCCCAGAACCAAAAACAAGTGAAATGCTTCAAGCGTGGCTTTCTGGAAAACAGGTAGTGGAGGACCAGATGACAGATTTTAAAAAATTAGAGAGTGATTCTTTAAGAAAGGACATCAAAGATATACCTAATAAACCAGCTAAGGAGAAAGATTTTCTCCGCCAACCGGAGATTAGAAGAGTAAAAAGAGAGCGGGGTTGTTCCTTTTGGGATCGATTTTCATCGGTTTCTAAACATTTTTTTGGAGCTGCGTTAAAAGCAAATGAGCAGATGGCAATTATGCCTCTTTGTATGCAGCTTATGACATGTTGGACGTGCTTTTGA 3969 0.4374 MLDQFMTSMNLLHEIVTELVFRIWVGIRKQLAQYMGPILCVLDLPLHWCNSSCLGVSNFVSPTSTSRETEESLKRPCWKICWTTFSDYSIHRLIDHFPSLCRKPQDFELDPLQEPKQLKGPPAAGNGQIRYRSPSAADLSEGQGNNSPPSYSVDQHLPEFESSKMLKRPVRQESFSDKIYRFRGVLLVISVPLLLITFVLYLMPASSSNELIQDYALTHRKINPDQKFSDSYAVIFDAGSSGSRVHVFHFDHNLDLVHIGQDLELFEQLKPGLSAYAQNPQGAAGSLISLLDKAESVVPQNLRPKTPVKVGATAGLRALEGDASDRILQAVRDLLKHRSTLKSEAGAVTVLDGTQEGAYQWVTINYLLGNLGQPYSKTVGVVDLGGGSVQMAYAISDKDAAKSPKVADGADPYIKEMFLRGRKYYLYVHSYLKYGLLAARAEILQVSEDSDNPCILSGFDGSYNYGGKSFKASASPTGSLNECKSVVLKALKVNESTCTHMKCTFGGIWNGGGGDGQKNLFVASFFFDRAAEAGIADPNLPVAKVHPVDFEDAAKRACETKLEDAKSIYQSVGEGNLPYMCMDLVYQYTLLVDGFGLDPWQEITLVKKVKYQDSLVEAAWPLGSAIEAGTWTVAQILIVIEGLLGPNLGPVTTVSCPRLDFNPAPAKSEVRFFEASHMAIVLICTALHISAHIISNLTVFSVVLLIRQNLYSVNHSRVFEQLPTTAFNFLKPSVPSTFLAPPRLGFSVLFSSSSSTTKVGVSTDAPTLGFDETSGDDEVEVVDGLDDNNHTHLSQLHLRDDDLGQDVKTILDILRGAGCRPSDMKCKLEHCNITVSSELVVEVLSRIRNDWEAAFTFFLWAGKQQNYVHSVREYHSMIYILGKMRKFDTAWTLIEEMRRGSSGPSLVTPQTLLIMIRRYCAVHDVGKAISTFYAYKRFNLQVGMDEFQGLLSALCRYKNVEDAEHLLFCNKNIFPFNTKSFNIILNGWCNLIVSPRHAERIWQEMGKRGIKYDVVSYASIMSCYSKASKLYKVFRLFDQMKKTKIAPDRKVYNSVIHALAKGRFVKEAVNLLRTMEDANISPDTVTYNSLISPLCKAHKIGEAKEILDEMVQRGLSPTIRTYHAFFRILRTKEEIFELLGKMRECGCYPTTETYLMLIRKFSRWQQLDIVFKLWSEMSESGVNRSSYIVLIHGLFLNGKLEEAYKYYNEMQEKGFPPEPKTSEMLQAWLSGKQVVEDQMTDFKKLESDSLRKDIKDIPNKPAKEKDFLRQPEIRRVKRERGCSFWDRFSSVSKHFFGAALKANEQMAIMPLCMQLMTCWTCF 1322
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele06g0491 1322 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 977 1012 IPR002885 -
Lele06g0491 1322 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 870 904 IPR002885 -
Lele06g0491 1322 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 1013 1047 IPR002885 -
Lele06g0491 1322 FunFam Apyrase 1 352 610 - -
Lele06g0491 1322 Gene3D - 232 626 - -
Lele06g0491 1322 Pfam GDA1/CD39 (nucleoside phosphatase) family 229 628 IPR000407 GO:0016787
Lele06g0491 1322 Pfam PPR repeat 1186 1215 IPR002885 -
Lele06g0491 1322 Pfam PPR repeat 1153 1182 IPR002885 -
Lele06g0491 1322 Pfam PPR repeat 874 899 IPR002885 -
Lele06g0491 1322 Pfam PPR repeat family 1082 1126 IPR002885 -
Lele06g0491 1322 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 1048 1082 IPR002885 -
Lele06g0491 1322 Pfam Pentatricopeptide repeat domain 1000 1059 IPR002885 -
Lele06g0491 1322 Gene3D Tetratricopeptide repeat domain 829 968 IPR011990 GO:0005515
Lele06g0491 1322 Gene3D Exopolyphosphatase. Domain 2 352 610 - -
Lele06g0491 1322 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 1183 1217 IPR002885 -
Lele06g0491 1322 MobiDBLite consensus disorder prediction 138 154 - -
Lele06g0491 1322 TIGRFAM PPR: pentatricopeptide repeat domain 874 901 IPR002885 -
Lele06g0491 1322 TIGRFAM PPR: pentatricopeptide repeat domain 1051 1084 IPR002885 -
Lele06g0491 1322 TIGRFAM PPR: pentatricopeptide repeat domain 1085 1118 IPR002885 -
Lele06g0491 1322 TIGRFAM PPR: pentatricopeptide repeat domain 1186 1217 IPR002885 -
Lele06g0491 1322 TIGRFAM PPR: pentatricopeptide repeat domain 1015 1048 IPR002885 -
Lele06g0491 1322 MobiDBLite consensus disorder prediction 135 154 - -
Lele06g0491 1322 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 1083 1117 IPR002885 -
Lele06g0491 1322 Gene3D Tetratricopeptide repeat domain 1133 1280 IPR011990 GO:0005515
Lele06g0491 1322 Gene3D Tetratricopeptide repeat domain 993 1132 IPR011990 GO:0005515
Lele06g0491 1322 PANTHER ADENOSINE/GUANOSINE DIPHOSPHATASE 176 628 IPR000407 GO:0016787
Lele06g0491 1322 CDD NBD_sugar-kinase_HSP70_actin 234 393 - -
Lele06g0491 1322 ProSitePatterns GDA1/CD39 family of nucleoside phosphatases signature. 351 366 IPR000407 GO:0016787
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele06g0491 Lele-ChrLele06 2975021 2985932 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele06g0491 167 628 Calmodulin-binding Proteins AT3G04080 68.103 0.0 614