LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Lele06g0490	ATGCTTGGTCCGATAAAGGCCGCAATTGGAGATGCAGTGCTCACTTTTATGTGGGTCTTCTGCGCATCCACGCTTGGATTAGCCACTAGCGTGATCACAGCATCACTCGGTCTTCAGCATCTATACTTCAATGGTCTCAATTACGCATCAATTATGGTCACCACCGTTCTTGTCTTTATCCTTGTCTTTGTCTTCACCATCATCGGCAATGCCTTGGGTGGTGCTACCTTCAACCCCACCGGCACTGCTGCCTTTTACGCCGTTGGTCTCGGCTCTGACACACTTTTCTCAATGGCTCTCCGTTTTCCTGCTCAGGCGTTAGGTGCTGCGGGTGGTGCTTTGGCAATTATGGAGGTGATGCCGCCGAAATTCAGACACATGATCGGTGGACCTTCGTTGAAGGTTGATTTGCATACTGGAGCTATTGCTGAAGGGTTTCTGACATTTGTCATCACTCTGGCTGTTCTTTTTATCATACTCAGGGGTCCTCGTAGTGAATTGTTGAAAACTTGGTTGCTGGCTATGTCTACCGTGACTCTGGTCATGGCTGGCTCTGCTTACACCGGTCCCTCCATGAATCCTGCCAATGTGAGTGATCACATCATTGCGTTAGCTTTTGAACTTTAA	627	0.4864	MLGPIKAAIGDAVLTFMWVFCASTLGLATSVITASLGLQHLYFNGLNYASIMVTTVLVFILVFVFTIIGNALGGATFNPTGTAAFYAVGLGSDTLFSMALRFPAQALGAAGGALAIMEVMPPKFRHMIGGPSLKVDLHTGAIAEGFLTFVITLAVLFIILRGPRSELLKTWLLAMSTVTLVMAGSAYTGPSMNPANVSDHIIALAFEL	208

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Lele06g0490	208	Gene3D	Glycerol uptake facilitator protein.	4	204	IPR023271	-
	Lele06g0490	208	PRINTS	Major intrinsic protein family signature	6	25	IPR000425	GO:0015267\|GO:0016020\|GO:0055085
	Lele06g0490	208	PRINTS	Major intrinsic protein family signature	58	82	IPR000425	GO:0015267\|GO:0016020\|GO:0055085
	Lele06g0490	208	PRINTS	Major intrinsic protein family signature	97	116	IPR000425	GO:0015267\|GO:0016020\|GO:0055085
	Lele06g0490	208	PRINTS	Major intrinsic protein family signature	143	161	IPR000425	GO:0015267\|GO:0016020\|GO:0055085
	Lele06g0490	208	PRINTS	Major intrinsic protein family signature	174	196	IPR000425	GO:0015267\|GO:0016020\|GO:0055085
	Lele06g0490	208	PANTHER	AQUAPORIN SIP1-1	3	197	IPR044222	GO:0015250
	Lele06g0490	208	SUPERFAMILY	Aquaporin-like	5	195	IPR023271	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Lele06g0490	Lele-ChrLele06	2973168	2973966	Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Lele06g0490	1	201	Major Intrinsic Protein MIP	AT3G04090	53.521	3.03e-62	192

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Lele06g0490	06	2973168	2973966	Lele06g0490	06	2973168	2973966	ECH
	Lele06g0490	06	2973168	2973966	Lele07g0700	07	3963117	3965692	hybridization
	Lele06g0490	06	2973168	2973966	Lele08g0499	08	3027255	3029763	hybridization