Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele06g0488 ATGGAGTTTCAGGGACTGAGGCAGAGGATGATGACGGAGTATAAAGATACAGTGGGAAGACGATATTTCACAGTAACAGGGGAACACCCAAATGAGGAAGTCATAGAGAAGATAATCTCAAACGGAGGTGAGGAATTCTTGAGCAAGGCAATACAAGAGCACGGTAGGGGAAGAGTTCTTGAGACCGTGGTGGAGATACAGGACAGACATGAGGTAACTAAAGAGAAAGAGAAGAGCCTTCTAGAACTGCACCAGGTGTTTCTAGATATGGCTGTGATGGTGGAGGCACAGGGTGAGAAGATAGATGATATTGAACACCATGTTCTTCATGTTTCCCACTATGTCAAGGAAGGGACCAAGGATTTGCGGAGTGCAAAGGAATACCAGGAGAGTAGCAGAACGTGGATGTGTATGGGATTGGTACTTCTCCTGATTCTTATTCTCTTAATTGTCATTCCCGTGGCAACCAGTCTCAGCAGTTCTTGA 486 0.4547 MEFQGLRQRMMTEYKDTVGRRYFTVTGEHPNEEVIEKIISNGGEEFLSKAIQEHGRGRVLETVVEIQDRHEVTKEKEKSLLELHQVFLDMAVMVEAQGEKIDDIEHHVLHVSHYVKEGTKDLRSAKEYQESSRTWMCMGLVLLLILILLIVIPVATSLSSS 161
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele06g0488 161 CDD SNARE_syntaxin1-like 62 123 - -
Lele06g0488 161 ProSiteProfiles t-SNARE coiled-coil homology domain profile. 63 125 IPR000727 -
Lele06g0488 161 SUPERFAMILY t-snare proteins 2 118 IPR010989 GO:0016020|GO:0016192
Lele06g0488 161 FunFam Syntaxin 132 56 156 - -
Lele06g0488 161 SMART tSNARE_6 58 125 IPR000727 -
Lele06g0488 161 Pfam SNARE domain 99 151 IPR000727 -
Lele06g0488 161 PANTHER SYNTAXIN 2 147 IPR045242 -
Lele06g0488 161 Pfam Syntaxin 2 98 IPR006011 GO:0016020
Lele06g0488 161 Gene3D - 59 158 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele06g0488 Lele-ChrLele06 2969138 2969623 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele06g0488 1 161 SNARE and Associated Proteins AT1G08560 69.325 1.56e-73 221