Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele06g0447 ATGGGAGGGAGATGGCCATTTTATGGGGGAACAAACTGTGCATATAAACACGCGAGGGTTGGCCATTGGTGCCTAGACCGGGAGAGGAAGCATCGCCAGAAAGCTTTTGGCGGCCAGTGTTTGGGAGTGCGTCTCTCCGGCATTCCTTTGAAGTCTCCGAAGCACCCTCCCTTCCTCATTCATCGCTCTTCCTCCATGGCTCTCTCAGACTCCTCACGCCGCAACTCTTTGATCCCTACCTTTCTCTACTCCTCTTCTTCCTCCACAAAAACCTTGCCTCTCCAGAACATGTTCAACTCTACCCCAGCGGCCGCCGCAGCCTCTTCTCCTGCTTCCAATCTGGAAGTCGTATCGCCCAGGCCCAACTTCGTGATTCCGGCTCCAAGTGAGCCTGGTAAGATCCAGATGTACTCTCCTGCCTTCTATGGTGCTTGTACGGTCGGTGGAATTCTCAGCTGTGGTCTCACTCACACGGCGGTTACCCCTCTTGACCTTGTCAAGTGTAATATGCAGATTGACCCTGCCAAGTACAAAAGCATATCATCTGGATTTGGAGTATTGCTTAAGGAGCAGGGAGTAAGGGGTTTCTTCAGAGGCTGGGTGCCTACCTTGCTTGGTTACAGTGCTCAGGGTGCTTGCAAATTTGGATTTTATGAGTTCTTTAAGAAGTATTATTCTGATATTGCCGGTCCAGAGTATGCGGCCAAGTACAAGACTTTGATCTACCTTGCTGGTTCAGCATCTGCTGAGGTTATCGCTGATGTTGCACTTTGCCCCTTTGAGGCCGTAAAGGTTCGAGTTCAAACTCAGCCTGGTTTTGCCAGAGGTTTGGTTGATGGATTGCCAAAATACGTTAGATCTGAAGGAGCACTGGGGCTATACAAAGGAATTGTTCCTCTGTGGGGACGCCAGATCCCATATACAATGATGAAGTTCGCTTCTTTTGAAACTATCGTTGAGTTGATCTACAAGCATGCCATCCCCACACCAAAGAATGAGTGCAGCAAACAGCTGCAGCTTGGTGTAAGTTTTGCTGGTGGATACATTGCTGGTGTATTTTGTGCTATTGTATCTCATCCTGCTGATAACCTCGTCTCCTTCCTGAACAATGCCAAGGGAGCTACAGTTGGTGACGCGGTGAAGAAGCTTGGTGTGTGGGGTCTTTTCACCCGTGGACTCCCTCTTCGTATTGTTATGATTGGAACTCTCACTGGAGCTCAATGGGGAATATATGATGCTTTCAAAGTTTTTGTGGGGCTGCCAACCACTGGTGGTGCCGCTCCTGCCGCCGCTCCGGCCTCTCAGCTAGCCAAGGCTTAG 1320 0.5008 MGGRWPFYGGTNCAYKHARVGHWCLDRERKHRQKAFGGQCLGVRLSGIPLKSPKHPPFLIHRSSSMALSDSSRRNSLIPTFLYSSSSSTKTLPLQNMFNSTPAAAAASSPASNLEVVSPRPNFVIPAPSEPGKIQMYSPAFYGACTVGGILSCGLTHTAVTPLDLVKCNMQIDPAKYKSISSGFGVLLKEQGVRGFFRGWVPTLLGYSAQGACKFGFYEFFKKYYSDIAGPEYAAKYKTLIYLAGSASAEVIADVALCPFEAVKVRVQTQPGFARGLVDGLPKYVRSEGALGLYKGIVPLWGRQIPYTMMKFASFETIVELIYKHAIPTPKNECSKQLQLGVSFAGGYIAGVFCAIVSHPADNLVSFLNNAKGATVGDAVKKLGVWGLFTRGLPLRIVMIGTLTGAQWGIYDAFKVFVGLPTTGGAAPAAAPASQLAKA 439
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele06g0447 439 Pfam Mitochondrial carrier protein 145 226 IPR018108 -
Lele06g0447 439 Pfam Mitochondrial carrier protein 241 325 IPR018108 -
Lele06g0447 439 ProSiteProfiles Solute carrier (Solcar) repeat profile. 338 417 IPR018108 -
Lele06g0447 439 FunFam Phosphate carrier protein, mitochondrial 140 418 - -
Lele06g0447 439 Gene3D Mitochondrial carrier domain 124 231 IPR023395 -
Lele06g0447 439 Gene3D Mitochondrial carrier domain 232 420 IPR023395 -
Lele06g0447 439 PANTHER SOLUTE CARRIER FAMILY 25 (MITOCHONDRIAL CARRIER PHOSPHATE CARRIER), MEMBER 3, LIKE-RELATED-RELATED 101 428 IPR044677 GO:0005315|GO:1990547
Lele06g0447 439 ProSiteProfiles Solute carrier (Solcar) repeat profile. 237 321 IPR018108 -
Lele06g0447 439 SUPERFAMILY Mitochondrial carrier 145 413 IPR023395 -
Lele06g0447 439 ProSiteProfiles Solute carrier (Solcar) repeat profile. 140 224 IPR018108 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele06g0447 Lele-ChrLele06 2734206 2738602 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele06g0447 71 439 Chloroplast and Mitochondria Gene Families AT5G14040 79.412 0.0 589
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele06g0447 06 2734206 2738602 Lele06g0447 06 2734206 2738602 ECH
Lele05g0631 05 3720148 3724746 Lele06g0447 06 2734206 2738602 ECH
Lele06g0447 06 2734206 2738602 Lele07g0661 07 3779463 3783941 hybridization
Lele06g0447 06 2734206 2738602 Lele08g0460 08 2806681 2811224 hybridization