Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele06g0424 ATGGCGAGTTCTTCAAGATACTGTGGATCATCAGTAGTGAACGGAGAATCTTCAGTAGTTCCGAATGGCTCTCAACTTTCGCAAGAGAGTGACGTGTATCATCAGATGACTGCGTCTCTTTCACAGTCTCTGCAACAAGAACGCCAGCAAGAGAAACAGCAAAAGCAGAAATCTGAACAGCAATCACACCCACAGCCACATAGCTTGATGGTGCCTCTTCCCATTGGGACCGAGCAGGAGCAAGACAGGGGACTACAACTGGTTCATCTGCTATTGGCTTGTGCAGAAGCAGTGGCCAAAGAAGAATACATGTTGGCGAGAAGGTACTTGCATCATCTGAATCGTGTAGTGACGCCTCTTGGTGTCTCCATGCAACGAGTAGCGTCCTGTTTCACCGAAGCCTTAAGCGCGAGGCTCGCAGCCACTCTCACCACAAACCCTAAGCCATCCTTCTGTGGTTTCCCACCAAACTCCACAGAAATCCCCAAAGTATACCAAATCGTCTACCAGTATTGCCCTTACATCAAATTCGCCCACTTCACCGCAAACCAAGCAATCTTCGAAGCGTTCGAAGCCGAAGAACGAGTGCATGTCATCGACCTAGACATTCTCCAAGGTTACCAATGGCCAGCACTCATGCAAGCACTAGCAGCCCGGCCCAGCGGGGCTCCATTTCTGCAAATAACTGGAGTCGGGCCGAGCATTGAGTCTGTGAGAGAAACGGGTCGGTGCTTGACGGAGCTAGCCCACTCTCTCAACATCCCCTTCGAATTCCACCCCCTGGGCGAGCAACTGGAAGATCTCAAGCCCCACATGTTCAACCGTCGGGTTGGAGAGGCATTGGCGGTGAACTCCGTAAATCGGCTTCACCGTGTCCCCAGGAACTGCCTGGGGGATTTACTAGGAATGATAAGGGACCAAGCCCCCAACATCGTGACCCTTGTTGAGCAAGAAGCGAGCCACAACGGATCCTACTTTCTGGGCAGATTTCTGGAGGCATTGCACTTCTACTCAGCGATATTTGATTCGTTGGACGCGACGTTCCCGCCGGAGTCTGCGAAGAGGGCGAAGGTGGAGCACTATATATTTGCGCCGGAGATAAGGAACATAGTGGAGTGTGAAGGAGCGGAGAGGATGGAAAGGCACGAGAGGTTGGAGAAATGGATGAAGATAATGGAAGGGAAAGGGTTCAAGGGGGTGGCACTGAGTCCAGACGCAGTGACTAAGGCGAAAATAGTGCTGGGATTGTATTCGTGCGATGGGTATAGGTTGACGGAGGACAAAGGTTGCTTACTTTTGGGATGGCATGGCCGATCCCTAATAGCCGCATCTGCATGGCGATGCTGA 1347 0.5182 MASSSRYCGSSVVNGESSVVPNGSQLSQESDVYHQMTASLSQSLQQERQQEKQQKQKSEQQSHPQPHSLMVPLPIGTEQEQDRGLQLVHLLLACAEAVAKEEYMLARRYLHHLNRVVTPLGVSMQRVASCFTEALSARLAATLTTNPKPSFCGFPPNSTEIPKVYQIVYQYCPYIKFAHFTANQAIFEAFEAEERVHVIDLDILQGYQWPALMQALAARPSGAPFLQITGVGPSIESVRETGRCLTELAHSLNIPFEFHPLGEQLEDLKPHMFNRRVGEALAVNSVNRLHRVPRNCLGDLLGMIRDQAPNIVTLVEQEASHNGSYFLGRFLEALHFYSAIFDSLDATFPPESAKRAKVEHYIFAPEIRNIVECEGAERMERHERLEKWMKIMEGKGFKGVALSPDAVTKAKIVLGLYSCDGYRLTEDKGCLLLGWHGRSLIAASAWRC 448
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele06g0424 448 Pfam GRAS domain family 87 447 IPR005202 -
Lele06g0424 448 MobiDBLite consensus disorder prediction 1 72 - -
Lele06g0424 448 MobiDBLite consensus disorder prediction 1 49 - -
Lele06g0424 448 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 52 443 IPR005202 -
Lele06g0424 448 Coils Coil 41 61 - -
Lele06g0424 448 ProSiteProfiles GRAS family profile. 78 447 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele06g0424 Lele-ChrLele06 2606845 2608270 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele06g0424 81 448 GRAS Transcription Factor Family AT1G66350 42.971 1.15e-97 300
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Lele06g0424 GRAS 5.3e-127 CL0063