LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Lele06g0413	ATGGAGAACTACTCTGTGTTATTTCCTTGTCCTGATCCTTCGAGTTATTCAGTGTCCACTAGCGCCATGGGAGGCTCTCATCTGCAGCTTCTTCACGGTTTGAACAATAACATGGAGGGTCATCAGATTAAGTCTAGTGGTGGTGGGTTCCTGGGAATGAGGCCTGCTGAAAGTGATGATCATGAAAAGTTGCAGAGAATTAAGGAGCAAGGTGGTTCTGGGAAAAAGAAGGGTGAGAAGAAGGCTCGGAAGCCTAGGCATGCTTTCCAAACAAGGAGTCAGGTTGATATACTTGATGATGGCTATCGCTGGAGAAAATATGGCCAGAAAGCTGTTAAAAACAACAAATTTCCCAGGAGCTACTACAGGTGCACGCATCAAGGGTGCAATGTGAAGAAGCAAGTGCAACGGCTAACGAAAGACGAGGGCGTAGTGGTGACAACATACGAGGGAGCTCACAACCATCCCATCGAGAAGACCAATGACAACTTTGAACACATTTTGAGTCAGATGCAAATATACACTCCCTTTTAG	534	0.4588	MENYSVLFPCPDPSSYSVSTSAMGGSHLQLLHGLNNNMEGHQIKSSGGGFLGMRPAESDDHEKLQRIKEQGGSGKKKGEKKARKPRHAFQTRSQVDILDDGYRWRKYGQKAVKNNKFPRSYYRCTHQGCNVKKQVQRLTKDEGVVVTTYEGAHNHPIEKTNDNFEHILSQMQIYTPF	177

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Lele06g0413	177	MobiDBLite	consensus disorder prediction	42	89	-	-
	Lele06g0413	177	Gene3D	WRKY domain	82	157	IPR036576	GO:0003700\|GO:0006355\|GO:0043565
	Lele06g0413	177	FunFam	WRKY transcription factor 57	84	158	-	-
	Lele06g0413	177	ProSiteProfiles	WRKY domain profile.	93	158	IPR003657	GO:0003700\|GO:0006355\|GO:0043565
	Lele06g0413	177	Pfam	WRKY DNA -binding domain	99	156	IPR003657	GO:0003700\|GO:0006355\|GO:0043565
	Lele06g0413	177	SUPERFAMILY	WRKY DNA-binding domain	90	157	IPR036576	GO:0003700\|GO:0006355\|GO:0043565
	Lele06g0413	177	MobiDBLite	consensus disorder prediction	55	76	-	-
	Lele06g0413	177	PANTHER	WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED	46	161	IPR044810	GO:0003700
	Lele06g0413	177	SMART	WRKY_cls	98	157	IPR003657	GO:0003700\|GO:0006355\|GO:0043565

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Lele06g0413	Lele-ChrLele06	2528198	2529283	Dispersed/Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Lele06g0413	38	177	WRKY Transcription Factor Family	AT5G13080	62.069	4.53e-57	174

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	TF	WRKY	Lele06g0413		WRKY	1.3e-26	CL0274