Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele06g0412 ATGAACTTGGACTGGAAAGACTTGGCGTGGGATCCATCTGGGTCGGAGCTATCAAATGGAGCGGCTTCGGTGGACTTGAGTCTTGGAGAGACTTCCGATTTCACACAAAAATCACCCTCATACACACCTAAGGACTTACCGAGAGACTCGAAATCGACATCATCGCCATGCGGTTCGTCAAAGAGGAGCCGTACGATGAATGGATCGACGCAGAGTGTGTCGTGCTTGGTGGATGGATGCGACTCCGACCTGAGTGATTGCAGAGAGTATCATCGGCGACACAGAGTGTGTGAGAAGCACTCAAAGACGCCCATTGTGTTGGTTGGGGGAAAGCAGCAGCGATTCTGCCAGCAATGCAGCAGATTCCATTCTCTGGGTGAGTTTGATGAAGTTAAGAGGAGTTGCAGGAAACGTCTTGATGGACATAACAGGCGCAGGAGGAAGCCTCAGCCGCCTTCTCTTTTCATGGCTGCTGAGAAATTCCTGAGCGGGTACAAAGGACCCAGAATCCTTCATTTCGGTAGTCCTCAGACGTACAACAACCCGTTTGTGAGAAGTATGTGGCCTGCCACTGCCAAAGCTGGAGCTGAACCAGTGATGATCAGTTATGACCAAAACAGTCTGCTAAGTTCCTTTGCTAATGTAGAGTATCGGCAGGATAAGCAGCTTCCTCTCTTTGGATTAAACAGTTCTAAAGCATGCCATGGCAATGGGGCAGTGTCTGGAATTCCCATGAGCCAAACAACTTCTGGTGCCGTTGCCCCATCACCAAGTGCAAATGGTGGCCGGAAGCTCGCTTCTGATTGCAAGCCTGGATCTTTTGATTCAAATTGTGCTCTCTATCTTCTGTCAACACTTCAGACACAAAGTCAAGAGTTAAGCTTGGTGCAGTCCACCGTAACCTGTCCAGTGCACTCATCTCCGTTAGAAGATTTGCATTTTGATGCTGGGGACAAATATTCATCATGCTCAGGAAGTCCACAAGAAAAGTCTACTAATCCATTATTGGTTGTGGATGCCGACACAGCCAACCTTCATTTCAGCCATATGATGCACATGAGGCCTGATGAAATTGTGGAAAATGGGGACTTGCCGACCTTTCCATTTTTCTGGGAGTAG 1119 0.4853 MNLDWKDLAWDPSGSELSNGAASVDLSLGETSDFTQKSPSYTPKDLPRDSKSTSSPCGSSKRSRTMNGSTQSVSCLVDGCDSDLSDCREYHRRHRVCEKHSKTPIVLVGGKQQRFCQQCSRFHSLGEFDEVKRSCRKRLDGHNRRRRKPQPPSLFMAAEKFLSGYKGPRILHFGSPQTYNNPFVRSMWPATAKAGAEPVMISYDQNSLLSSFANVEYRQDKQLPLFGLNSSKACHGNGAVSGIPMSQTTSGAVAPSPSANGGRKLASDCKPGSFDSNCALYLLSTLQTQSQELSLVQSTVTCPVHSSPLEDLHFDAGDKYSSCSGSPQEKSTNPLLVVDADTANLHFSHMMHMRPDEIVENGDLPTFPFFWE 372
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele06g0412 372 MobiDBLite consensus disorder prediction 16 68 - -
Lele06g0412 372 Gene3D - 66 136 IPR036893 GO:0003677|GO:0005634
Lele06g0412 372 ProSiteProfiles Zinc finger SBP-type profile. 72 149 IPR004333 GO:0003677
Lele06g0412 372 SUPERFAMILY SBT domain 73 154 IPR036893 GO:0003677|GO:0005634
Lele06g0412 372 PANTHER SQUAMOSA PROMOTER-BINDING-LIKE PROTEIN 4 17 323 IPR044817 GO:0003677
Lele06g0412 372 Pfam SBP domain 75 148 IPR004333 GO:0003677
Lele06g0412 372 MobiDBLite consensus disorder prediction 1 68 - -
Lele06g0412 372 FunFam Squamosa promoter-binding-like protein 14 66 136 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele06g0412 Lele-ChrLele06 2518026 2519810 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele06g0412 68 173 SBP-box Gene Family AT5G50670 66.038 2.41e-46 160
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF SBP Lele06g0412 SBP 1.5e-30 No_clan