Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele06g0391 ATGATGCTGGAGACATACACCATTAAAGACCTGAGAAAAGCAACGGAGGACTTCAGTTCTAGCAATCTCATAGAAGGATCTGTATTTCAGGGCCGTCTAGAAGGGAAGAGCATGGCGATCAAACAAACACACACAGAAACGGTGTTAAAAATCGATCTTGGGCTCTTCCATAACACAATCCACCATCACCCCAACATTCTTCGAATGCTCGGAACGTGTTTGACAGAAGATCCCCAGTCATGTCTGGTTTTCGAGTATGCAAAGAACGGGTCTTTGAAAGACTGGCTTCATGGTGGGTTGGCCATAAAGAACGAGTTCATATCATCCTGCTATTGCTTCCTCAAATGGAGTCAGAGACTCAGGATCTGCCTCGACGTGGCCATGGCCCTGCAATATATGCACCACGTCATGAACCCAAGCTATGTCCATAGAAATATAAAGAGCAGAAACATCTTTCTAGACGAAGAATTTGGCGCCAAGATAGGCAACTTTGGGATGGCAGGTTGTGTTGAGAACGAAACAGAGGATCCAAACTTCTACTCAACCAACCCTGCATCTTGGAGTCTTGGCTATTTAGCACCAGAATATGTACATCAAGGTGTGATTTCTCCAAGTACTGATATTTTTGCTTATGGGGTGATTTTGCTGGAAGTTTTGTCTGGTCAGACACCGATAAGCAGACCCAATGAGAAGGGAGAAGAAGGAAGTGTTTGGCTCAGTGATAAAATAAAGTCAGTTTTGAAGTCAGAAAATGAGGAAGAACTGAGAGGGTGGATGGACAAGGCATTAGGTGAGAATTATTCATTGGATGAAGCAGAAACAGTGGCGAATATTGCGAGAGCTTGTGTGGAGGAAGATTATGGTATGAGGCCAAGTGCAGGGGAAATTGTGGAGAAGCTAACAAGATTGGTGGAGGAACTTCCAGAAGAAGAACACGTGTTAATGTCTGAGAGCTCTTCCAAGCCTCTGGTGAAAGCAGTGACAAAACCCTGA 993 0.4451 MMLETYTIKDLRKATEDFSSSNLIEGSVFQGRLEGKSMAIKQTHTETVLKIDLGLFHNTIHHHPNILRMLGTCLTEDPQSCLVFEYAKNGSLKDWLHGGLAIKNEFISSCYCFLKWSQRLRICLDVAMALQYMHHVMNPSYVHRNIKSRNIFLDEEFGAKIGNFGMAGCVENETEDPNFYSTNPASWSLGYLAPEYVHQGVISPSTDIFAYGVILLEVLSGQTPISRPNEKGEEGSVWLSDKIKSVLKSENEEELRGWMDKALGENYSLDEAETVANIARACVEEDYGMRPSAGEIVEKLTRLVEELPEEEHVLMSESSSKPLVKAVTKP 330
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele06g0391 330 MobiDBLite consensus disorder prediction 311 330 - -
Lele06g0391 330 Pfam Protein tyrosine and serine/threonine kinase 52 300 IPR001245 GO:0004672|GO:0006468
Lele06g0391 330 PIRSF ILK 8 319 - -
Lele06g0391 330 Gene3D Phosphorylase Kinase; domain 1 1 86 - -
Lele06g0391 330 ProSiteProfiles Protein kinase domain profile. 1 315 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele06g0391 330 PANTHER LYSM-DOMAIN RECEPTOR-LIKE KINASE-RELATED 3 307 - -
Lele06g0391 330 SUPERFAMILY Protein kinase-like (PK-like) 5 300 IPR011009 -
Lele06g0391 330 FunFam PTI1-like tyrosine-protein kinase 3 87 313 - -
Lele06g0391 330 Gene3D Transferase(Phosphotransferase) domain 1 87 322 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele06g0391 Lele-ChrLele06 2398549 2399541 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele06g0391 2 325 LysM Receptor-like Kinase (LYKs) Gene Family AT3G01840 46.491 2.91e-93 289
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LysM Lele06g0391 PK_Tyr_Ser-Thr 6.9e-32 CL0016