Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele06g0388 ATGAGTTTACGGTTAAGTTTGTATGAGCACAAGGCATCATTCAGCTTAAGGGTTCTTAGCCTGGCTTCCTTGGGAATTTGGGATCCTCTTCCGGATAAGATTCACCGAATATCTCTGCTCGAAGCTCTAGACTTAAGCTCAAATTTCTTATTCGGTTCTTTCCCGCCGAAAATTTCCACAATGGTAAAGCTCAATACACTGAAACTCGATGGCAATTTTTTCAACGACATAATGCCCGACTGGTTCGATTCATTGTCTAATCTAAATGTCTTGAGTTTGAAAACCAACGCCTTGCGGGCTTCATTCCCCTCGTCATTGTGCAAAATTAAGACCCTCACCGATATTTCTCTGTCTCGCAATGAGCTATCTGGTAAATTACCTGATCTGAGAGCTCTCACTGGCCTACATGTACTGAATTTAAGAGAAAACCGTTTAGGTTCTGAACTGCTATTGATTCCCACTGGAGTGGTCATAGTTCTGCTAAGCAATAACTCATTTTCTGGTAGCAATGTGCTGAGCGGGTCACTTCGGGATCAACTGAGTTGGGGCAGCAAAGTTGGCTTTGTGGATATTTCCAGTAACAAATTAATTGGTGGACTTCCTTCTTGCTTGGCCAATACGTCTGATAGAAGAGTTGTCAAATATGATGGAAATTGTTTGACTCTCGATTCTCAAGATCCGCAGCTAGGGCCTTATTGTGAAGAATCCAATATGAACAAGAAGAAATCGATGGCGTGGAAAATAGCTGTAGCAGGGGCCATTATTATTGAACTTGTTCTTGTCCTGGGGATTTCGTATGAGGAGTTTTCTTCTGTAGAAAATGTCTGGGGAGAGAGACAGCTAAGCATCATTTCTTGCAAAAGACTGCCAGATAATTCCACTACAGTTTCATCTGAACTCCTCGCAAATGCCAGGTTCACTTCCCAGGCCGTGAAACTAGGGGCACAAGCTACATCAATCTGTCGACCAATTTCAGTTAAAGAGTTGAAGGAAGCCACAAGAAACTTTGACATCTATACAAAGCTCGGTTGGATTTACTCTCAAAGCTCCAACATCCAAATTTGGTTGGCCTCTTGGGTTGCTGTATTGATACTAATGAATAAGACGACTCAACCACCGACAAACTTCATCTTTTATGAGTATGTGCCCGATGGGAGTTACCGTGCCTATCTGTCAGGTTGTTTTAACCACCGATTGAAGACAAACAATATTTTGCTTGATGAGCATCATTTTCCCAAATTAAGCGACTATGGAATGTCCATCCTCGGAGAAGAGACTGAAAGGTTTGAGTATGCGGCTCAAGTGCAGGCCACAGTAGATGCAGACCAGAAATCAGAGTCCAAGTCAGAATCTCAAGATTATAGGAGGGAAAAAACCTGGGATCCAACTGGACTAGCAGTTGAGAATTTTCTGCAATTGTATGTTAGTCGTGCTCGTAAACTCTGTTTTTTATGCTCAATGCAATCATTTTCTGAAAGGCGGGAGGTTTTGTCCTTACTTCATTTTCAACTTTCAAATAGTACGCGTGGAATCATCATATCGGCAGCGATGGTTCTAGGCTTGAGAGGAAAGAACACCGTTCAAATTGATTACCTCGTTCATATACAGGAGATCAAACCTTGGCCCCCTACTCAATCCCTCAGATCCCTTCGTTCTGTAGTAATCCAATGGCGAAATGGTGAACGCAGTTCAGGTTCTACCAATCTTGTTGTGCCCTCTCTTGGTTCTGTTATCGGTGAAGGAAAAATTGAATTTAACGAGTCATTTAATCTTCCTGTTACTCTGTTGAGGGATATGTCTGTCAGAGGCGGTAATGCTGATGTATTCCAAAAGAATATTTTGGAGTTCAACTTGTATGAGACTCGAAGAGATAAGGCCGTTAAAGGTCAGTTATTGGGAACTGCTGTCATAGATTTGGCAGATTATGGTAGGCTCAAAGAGACGTTGAGCATTAGTGCTCCATTGAACTGCAAGAGAAACTACAGAAACACAGATCAGCCACTTTTGTTCATTAAAGTTCAGCCTATTGACAAGGATCACAATAGCTCCTCTTTAAAGGACATGTCTTCAAAAGCTGTGTCAAAGGAAAATAGTGTTGGTGATTCTGTTTCAAAATTGATGAATGAAGAATACACTGAGGAGGCTGAGATTGCCTCTTTTACTGATGACGATATTTCCTCACATTCATCTGTAGCCGCAGTTACTTCTGCCCTTGAGTCAAACTCAAAAGGAAATATAACTCCTGAACTTCAAGAGACTGGATCTACTCAAAACACAGATGAACAAGCTGTAACTGAAGGTGTCGAAGATCAAATCCCATTGAGTACAGGTGCATATACCTTAGATGGGACAAATATTGGTTTGGAAAGCAATAGTATGAAAAGTGGAAGATTAAAGCATGTAAAGTCTGAAAGATCACCTACAGACTCAACACTGAGTACTGGATCTCCTGGCAGTAATCATCATGCTGAAGTAAATGATGCTGCCATGGTTGAAGATGTGCAAAATAATGGAGGGAATATAAGAGTCAGTGACAAAAAAGATGCCAAGGTTTATTCAAAGGAAGCAAGGAGTTCGATTTCAGACAGAAAAATCAATCTTTTGGAAAGCAAGATAAAGATGCTTGAAGGAGAGTTAAGAGAAGCTGCGGCTATAGAGGTTGCTCTATATTCTGTAGTTGCTGAGCACGGGAGCTCCATGAGTAAGATATATGCCCCAGCTCGGCGCCTTTCTAGGCTGTATCTTCATGCTTGTAAAGAAAATCTTAAAGCAAGAAGGGCTGGGGCGGCTAAAAGTGCTGTTTCTGGACTAGTTCTAGTTGCAAAGGCGTGTGGAAATGATGTCCCAAGGTTGACATTTTGGTTGTCTAATTCTATTGTGTTAAGAACAATTGTATGCCAAACCACCAAAAAAGTGGTGCCTTCTTTTACTGCTGGACCCAGTGTAAAAAGGAAAATTGGGAGAGAGGGGAACGACAAGATATCTCCCTCATTGCGATGGAAGGGGTCCTCAACGAGGAAAAATGAAAATACCACTGTTGAGCAAGGAGGTTTCGGTAACTGGGATGACCCCCTTGTATTCACCTCAGCACTGGAAAAGGTAGAAGCTTGGATCTTCTCTCGAATTCTGGAATCTATATGGTGGCTGACTATGACTCCCCACATGCATCATGTTGATGCAAAGGTCACCAAAAAGGGTGTGGGCTCTTCCTCATGGAAAACCTTCCGAAATTGGTCTAGCTCATGTGATAATGAACAGGGGAAATTTTCACAAGATATTTGGAAGAGTGCTTTTAGGGAAGCCTATGAAAAGCTCTGTCCTATTCGAGCTGGAGGGCACGAGTGTGGCTGTTTGCCAGTGCTGTCCAGATTGATAATGGAGCAATGTGTGGCAAGATTAGATGTGGCTATGTTCAATGCAATTCTTCGTGAATCTGCTGAAGAAATCCCAACTGATCCTGTATCCGATCCCATTAGTGATCCCAAGGTTCTTCCTATACCCCTCGGAAAATCAAGCTTTGGAGCCGGTGTGCAGCTAAAAAGTGCGATTGGGAACTGGTCTAGATGGCTTACAGACCTATTTGGTATTGATGACGATGACTCACTTCAAGACAACGATGACCTTGAATCAGCTAATAATGATGGGAGGCAAAATGCACATTGCAAGTCCTTCCATCTTCTTAATGCACTAAGTGAACTCTTGATGCTTCCTAAGGATATGCTACTTGGTACATCTGCCAGGAGAGAGGTATGCACGATGTTTAGCGCACCAGTAATCAAGAGGGTTTTAAACGATTTTGCCCCAGATGAGTTTTGCCCTGATCCAATTCCAACTGGTCTTTTTGAAGCTCTGGATTCAGAGGATGATGTCGAGGATGGTGAGGACTGCATAAAAAACTTCCCATGCATTGCGACTCCCATAGTGTATATACCTCCCCCTGCATCTTCCATAGCAAGCATAATTGGAGAGGTTGGAAGTGAATCTAAGCTGAGAAGTAGATCTTCGGTTCTCAGAAAGGCATACGCCAGTGATGATGAGCTCAATGAATTAAACTCTCCCCTATCTTTCACAGCTAACGATAGTCTCATGTCAAAAGCACATTCTATAAAATCCAATTGCAAGTCCAAAGATATTCAAAATTCATCTGCTGTCAGATATAAACTCCTCATGGATGTATGGAAGAACAGCGACTAG 4194 0.423 MSLRLSLYEHKASFSLRVLSLASLGIWDPLPDKIHRISLLEALDLSSNFLFGSFPPKISTMVKLNTLKLDGNFFNDIMPDWFDSLSNLNVLSLKTNALRASFPSSLCKIKTLTDISLSRNELSGKLPDLRALTGLHVLNLRENRLGSELLLIPTGVVIVLLSNNSFSGSNVLSGSLRDQLSWGSKVGFVDISSNKLIGGLPSCLANTSDRRVVKYDGNCLTLDSQDPQLGPYCEESNMNKKKSMAWKIAVAGAIIIELVLVLGISYEEFSSVENVWGERQLSIISCKRLPDNSTTVSSELLANARFTSQAVKLGAQATSICRPISVKELKEATRNFDIYTKLGWIYSQSSNIQIWLASWVAVLILMNKTTQPPTNFIFYEYVPDGSYRAYLSGCFNHRLKTNNILLDEHHFPKLSDYGMSILGEETERFEYAAQVQATVDADQKSESKSESQDYRREKTWDPTGLAVENFLQLYVSRARKLCFLCSMQSFSERREVLSLLHFQLSNSTRGIIISAAMVLGLRGKNTVQIDYLVHIQEIKPWPPTQSLRSLRSVVIQWRNGERSSGSTNLVVPSLGSVIGEGKIEFNESFNLPVTLLRDMSVRGGNADVFQKNILEFNLYETRRDKAVKGQLLGTAVIDLADYGRLKETLSISAPLNCKRNYRNTDQPLLFIKVQPIDKDHNSSSLKDMSSKAVSKENSVGDSVSKLMNEEYTEEAEIASFTDDDISSHSSVAAVTSALESNSKGNITPELQETGSTQNTDEQAVTEGVEDQIPLSTGAYTLDGTNIGLESNSMKSGRLKHVKSERSPTDSTLSTGSPGSNHHAEVNDAAMVEDVQNNGGNIRVSDKKDAKVYSKEARSSISDRKINLLESKIKMLEGELREAAAIEVALYSVVAEHGSSMSKIYAPARRLSRLYLHACKENLKARRAGAAKSAVSGLVLVAKACGNDVPRLTFWLSNSIVLRTIVCQTTKKVVPSFTAGPSVKRKIGREGNDKISPSLRWKGSSTRKNENTTVEQGGFGNWDDPLVFTSALEKVEAWIFSRILESIWWLTMTPHMHHVDAKVTKKGVGSSSWKTFRNWSSSCDNEQGKFSQDIWKSAFREAYEKLCPIRAGGHECGCLPVLSRLIMEQCVARLDVAMFNAILRESAEEIPTDPVSDPISDPKVLPIPLGKSSFGAGVQLKSAIGNWSRWLTDLFGIDDDDSLQDNDDLESANNDGRQNAHCKSFHLLNALSELLMLPKDMLLGTSARREVCTMFSAPVIKRVLNDFAPDEFCPDPIPTGLFEALDSEDDVEDGEDCIKNFPCIATPIVYIPPPASSIASIIGEVGSESKLRSRSSVLRKAYASDDELNELNSPLSFTANDSLMSKAHSIKSNCKSKDIQNSSAVRYKLLMDVWKNSD 1397
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele06g0388 1397 PANTHER NUCLEAR PORE COMPLEX PROTEIN NUP205 848 1394 IPR021827 GO:0005643
Lele06g0388 1397 MobiDBLite consensus disorder prediction 680 701 - -
Lele06g0388 1397 Pfam Leucine rich repeat 63 122 IPR001611 GO:0005515
Lele06g0388 1397 MobiDBLite consensus disorder prediction 686 701 - -
Lele06g0388 1397 ProSiteProfiles C2 NT-type domain profile. 519 677 IPR019448 -
Lele06g0388 1397 Gene3D Ribonuclease Inhibitor 3 239 IPR032675 -
Lele06g0388 1397 Pfam N-terminal C2 in EEIG1 and EHBP1 proteins 524 658 IPR019448 -
Lele06g0388 1397 SUPERFAMILY Protein kinase-like (PK-like) 369 428 IPR011009 -
Lele06g0388 1397 Coils Coil 865 885 - -
Lele06g0388 1397 MobiDBLite consensus disorder prediction 736 766 - -
Lele06g0388 1397 MobiDBLite consensus disorder prediction 788 823 - -
Lele06g0388 1397 SUPERFAMILY L domain-like 15 221 - -
Lele06g0388 1397 MobiDBLite consensus disorder prediction 736 765 - -
Lele06g0388 1397 MobiDBLite consensus disorder prediction 807 821 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele06g0388 Lele-ChrLele06 2379014 2390834 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele06g0388 15 453 Miscellaneous Gene Families AT5G14210 39.572 7.73e-92 313
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele06g0388 06 2379014 2390834 Lele06g0388 06 2379014 2390834 ECH
Lele06g0388 06 2379014 2390834 Lele07g0594 07 3389728 3395274 hybridization
Lele06g0388 06 2379014 2390834 Lele08g0394 08 2423697 2434347 hybridization