Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele06g0387 ATGAGCAGGATTCGCCGTGGTCATCAAGTTTATACACAAGTTTGTGCTTCATGTCATTCCATGTCTTTGGTATCGTATCGTGATTTGGTTGGTGTTGCTTATACAGAAGACGAGGTAAAGACTATGGCAGCTGAGATTGAGGTGGTTGATGGCCCTAATGATGAGGGTGAGATGTTCACACGCCCTGGTAAATTCAGTGATCGCTTTCCTCTGCCATATGCAAATGAAGCAGCAGCTCGGTTTGCTAATGGAGGAGCTTATCCTCCAGATCTAAGTCTTATTACCAAAGCCCGCCACAATGGTCAAAACTACGTATTTTCCCTTCTTACAGGTTATCGTGATCCCCCTGCTGGTGTTTCGATTAGAGAGGGATTGCACTATAATCCTTATTTTCCTGGTGGAGGAATTGCCATGCCTAAAATGCTGAATGATGGTGCTGTTGAGTATGAAGATGGCACCTCTGCTACAGAATCGCAGATGGGAAAAGATGTCGTGACTTTCTTGGCTTGGGCTGCTGAACCTGAGATGGAAGAGATAAAACTGATGGGCTTCAAATGGATTTTTGTACTATCCCTGGCACTGCTTCAAGCTGCCTATTTCCGTCGATTGAGATGGTCTGTTCTCAAGTCTCGCAAGCTGGTTGTTGATGTTGTCAACTAG 660 0.4515 MSRIRRGHQVYTQVCASCHSMSLVSYRDLVGVAYTEDEVKTMAAEIEVVDGPNDEGEMFTRPGKFSDRFPLPYANEAAARFANGGAYPPDLSLITKARHNGQNYVFSLLTGYRDPPAGVSIREGLHYNPYFPGGGIAMPKMLNDGAVEYEDGTSATESQMGKDVVTFLAWAAEPEMEEIKLMGFKWIFVLSLALLQAAYFRRLRWSVLKSRKLVVDVVN 219
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele06g0387 219 FunFam Cytochrome c1, heme protein, mitochondrial 175 219 - -
Lele06g0387 219 FunFam Cytochrome c1, heme protein 1 174 - -
Lele06g0387 219 PRINTS Cytochrome C1 signature 124 135 IPR002326 GO:0009055|GO:0020037
Lele06g0387 219 PRINTS Cytochrome C1 signature 86 110 IPR002326 GO:0009055|GO:0020037
Lele06g0387 219 PRINTS Cytochrome C1 signature 135 154 IPR002326 GO:0009055|GO:0020037
Lele06g0387 219 PRINTS Cytochrome C1 signature 174 189 IPR002326 GO:0009055|GO:0020037
Lele06g0387 219 PRINTS Cytochrome C1 signature 53 73 IPR002326 GO:0009055|GO:0020037
Lele06g0387 219 PRINTS Cytochrome C1 signature 155 174 IPR002326 GO:0009055|GO:0020037
Lele06g0387 219 PRINTS Cytochrome C1 signature 8 27 IPR002326 GO:0009055|GO:0020037
Lele06g0387 219 SUPERFAMILY Cytochrome c 3 173 IPR036909 GO:0009055|GO:0020037
Lele06g0387 219 SUPERFAMILY Cytochrome c1 subunit of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase), transmembrane anchor 174 218 IPR021157 -
Lele06g0387 219 Pfam Cytochrome C1 family 3 206 IPR002326 GO:0009055|GO:0020037
Lele06g0387 219 Gene3D - 1 174 IPR036909 GO:0009055|GO:0020037
Lele06g0387 219 PANTHER CYTOCHROME C1 3 216 IPR002326 GO:0009055|GO:0020037
Lele06g0387 219 Gene3D - 175 218 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele06g0387 Lele-ChrLele06 2373517 2375042 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele06g0387 2 219 Chloroplast and Mitochondria Gene Families AT3G27240 88.532 7.74e-133 374