Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele06g0371 ATGTGCATGAACACCCCGCCAATCAACTATCTCTATTTTACTCTCATTGATTTCCACGTCATCCTCGCTCGAACTTTTAACTCTCCTGTTTTCCAAATCAACCACATACGTGGACACCCTCCTCTGAAACTTGTCGTTGAAAACCTTCCCACACCTGGTACTCGTAATGATTTATCCCCATCGCTCCCCGGTTCGCATCCACAGCCACGTACAATCCCTTCTGGCGAACATGGTGCCCCACATTTATCAGATTCTCGTTCAACATTTCTGGCCTCACTATGCTCTCGTGCCTCTCACGTCTCCGACGATCTTTCATGGCAAGCAGAAGGCACGGGGTGGGATGGAATGGGAATGCTCGTCGGCGTGAGTCACGTCATTTCCGTTTATGCCGATGTTTTCTCGTCGTCATTCTTGTTTCGTGACAGGGGAAAGATGCCTTGTTGTGATAAGATCGGCCTGAAACGAGGACCTTGGACTATTGAGGAAGATCACAAGCTCATCAACTTCATCCTCAACAACGGCATCCATTGTTGGCGCATGGTTCCCAAGCTTGCAGGTCTTCTGAGATGTGGGAAGAGCTGCAGATTGAGATGGATCAATTATCTGAGGCCCGACCTCAAGAGAGGTGGCTTCACTGAAACGGAAGAGGATCAAATTATTCAGCTACATTCACGTCTTGGTAACAGATGGTCTAAGATTGCTGCACATTTTCCTGGGAGAACAGACAATGAGATCAAGAACCATTGGAACACGAGGATCAAGAAGAAGATGAAGCTCATGGGTCTGGATCCTGTGACACACATGCAGATTCAGCAAATTCAAAAGGAAGTAGTCACTGGTAGTAAGAAACAGATCAGAAACCAGTCAAGGCCGAGTTCTGAAGAAAATGTGGAGATGATAATGAAGTCCTCCTCCAACGGAAGCGTCTGCACTCAGGTTGTTTCAGAAGAACAAGGGAAGAACAAGGAAGAATTAAACAAGGTGACAACTTGGGATGATACCTATGATCTTCCGAACAAAAACGACAAAGTATGCTCCGACTACTTGGACTTGGGATCATGGATGATGATCCAAGAGAAAAACACCAGCACAAGCTCTTCATCTTTTTCTCTGGACGATTCTGGCCACCTTTCCATGAGTGAATCTTCTTATCTGCAGGAAAACTCTTTAATGGAATGGGTTGATAGTATTAGTATGGAATCCATTCTGCAATGGGATGGCTTCGATCCTCTGGATTAG 1239 0.4592 MCMNTPPINYLYFTLIDFHVILARTFNSPVFQINHIRGHPPLKLVVENLPTPGTRNDLSPSLPGSHPQPRTIPSGEHGAPHLSDSRSTFLASLCSRASHVSDDLSWQAEGTGWDGMGMLVGVSHVISVYADVFSSSFLFRDRGKMPCCDKIGLKRGPWTIEEDHKLINFILNNGIHCWRMVPKLAGLLRCGKSCRLRWINYLRPDLKRGGFTETEEDQIIQLHSRLGNRWSKIAAHFPGRTDNEIKNHWNTRIKKKMKLMGLDPVTHMQIQQIQKEVVTGSKKQIRNQSRPSSEENVEMIMKSSSNGSVCTQVVSEEQGKNKEELNKVTTWDDTYDLPNKNDKVCSDYLDLGSWMMIQEKNTSTSSSSFSLDDSGHLSMSESSYLQENSLMEWVDSISMESILQWDGFDPLD 412
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele06g0371 412 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 203 257 IPR017930 -
Lele06g0371 412 Gene3D - 152 208 - -
Lele06g0371 412 PANTHER TRANSCRIPTION FACTOR MYB8-RELATED-RELATED 144 355 - -
Lele06g0371 412 CDD SANT 157 202 IPR001005 -
Lele06g0371 412 ProSiteProfiles Myb-like domain profile. 203 253 IPR001005 -
Lele06g0371 412 Pfam Myb-like DNA-binding domain 155 202 IPR001005 -
Lele06g0371 412 Pfam Myb-like DNA-binding domain 208 251 IPR001005 -
Lele06g0371 412 SMART sant 207 255 IPR001005 -
Lele06g0371 412 SMART sant 154 204 IPR001005 -
Lele06g0371 412 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 150 202 IPR017930 -
Lele06g0371 412 ProSiteProfiles Myb-like domain profile. 150 202 IPR001005 -
Lele06g0371 412 FunFam MYB transcription factor 209 270 - -
Lele06g0371 412 MobiDBLite consensus disorder prediction 49 82 - -
Lele06g0371 412 SUPERFAMILY Homeodomain-like 152 249 IPR009057 -
Lele06g0371 412 CDD SANT 211 251 IPR001005 -
Lele06g0371 412 Gene3D - 210 257 - -
Lele06g0371 412 FunFam MYB transcription factor 152 208 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele06g0371 Lele-ChrLele06 2277187 2282168 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele06g0371 143 294 MYB Transcription Factor Family AT1G66230 67.105 1.91e-70 221
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Lele06g0371 Myb_DNA-binding 3.4e-11 CL0123