Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele06g0369 ATGTCAACTTCTACAGCTCCATTCAAATTCTTGGGCCAACTTATACGGAAACATTGGAAAAGTCTTGATCACGTTGAAATGATCAACTTCTCAACCCTGAATGAACTTGAAAAGCTTTTTGGACCAAATTCATACCAGCCGATGTTAAAAATAAAAGAAAAAATTGAGACAATTCAGGGAAAGGAAAGAGGTTGGAAGGTCGTGCCAACATTTGGAATGAAGCCAATGACTGAGAATTCCTATTTGAAACAGAGACAAGAAATGGCTTCTTGGAATTCAATTCCTCTTCACGCTTTGTACCAAGTACTGGGTTGGTTAACATTCATTTCCTGGGCCATCAGTTCTTACCCGCAAATCATCTTGAACTTCCGTAGGAAAAGTGTGGTGGGTTTAAACCTTGATTACGAGATATTCAACTTAACAAAGCACGCCTCCTATCTCATCTACAACGCTTCCCTCTACTTCAGCACCTTCATTCAGAAGCAATACTTCCAGAGATATGGTTTTGCACAGATGATTCCTGTGGCCGCTAATGATGTTGCTTTCTCCACTCATGCTGTTATAATGACCTCTATTGTGTTATTCCAAGTTGCAATCTATGAACGGGGAAGTCAGGAATTCTCCAAATATGCCATTACAATAGTCTGCGTGGTATGGTCCATTGCTGCAGTTTGTTTCTTCATAGCATTATCTGACCACTCTTGGCTTTGGCTCATCTCCATCTTCAACTCAATTCAAGTATGCATGACCATAATCAAATACCTGCCCCAGGCATTCATGAACTTCTTGAGGAAGAGCACGGATGGATTCAGCATTGGCGGCGTTCTGCTTGATTTTTCTGGAGGAGTTTTCAACTACTCACAGATGGCCGTTCAATCTATAGATCAAGGTTCATGGGTGAACTTCTTTGGGAACGCTGGGAAAGTACTTATATCCTTGGTGACTATATTCTATGATTCAGTGTTGATGTTTCAACACTATGTAGTGTATCATGGGAAGAAATCAGCTGGAACTTATCCCAAAGCTAATGACAAAACCGGAGAGCCGCTTATCCGTGAAACTTCAATAGATGAAGTTACAGATGAACAAATAAAGGGTTTGCAGAAATCTTGTGATCCGCCCTTACCGCAAGAGCAGTTTCTGAAGAGGTGCTTGTTTGAAGATAATGCGACTTTTGTAAATGTTTCGTTTTGGTCCATGGAGAGTATAGAACCTGATATAAAAAGACATCCGCCAGAATATTATATGCAAAATGAAGATCAAATATCTCCTGGAGCAGCAATTGACGTTGGACAGAGTCAAAGCCCCAAGGCTTCCTCAATTGCAGATAGCGACATGGTCATTGATACTGAGAATGAGTGTAAAAGCCCGAATATTGGTCCTGTCTACCCAAGTCAGATGGGAAATGATGATGATTGTCTGAATTCAAACATTTCTTGTGATCACAATTTTCATATTGAGGCTGTGAATGGAATTCTCTCTCAGGAATCAGACATCTCTTCTGTTGATGTATCAAGTAACATTGATGTCATAAAAACTGAGGGGGAGCCGTCCATGGCACCACAAGTTGGCATGGAGTTTGATTCAGAAGACCATGCTTACAAGTGTTATAGCAGGTATGCTGTTTTGAAAGGTTTCAGCATAAGAAAAGATTTTGTCAACAAAAGTAGGGTGAATGGTGCAGTGTTATCTAGAAGATACACTTGCTACAGGCAGGGTTATCGGCCTAATAAACATAATGACAATGTGAGGAAATCCCAGCCAGAAACAAGGACTGGATGCCTGGCACATATGACTATTGCCCGTCTGCCCCATGGCAAGTTTCGTGTCACTGACTTGGAAACAGAGCACAATCATGAGTTTGCAACACCCTGTACTGTTCATATGTTGCCATCGCAGAGAAGATTGAGTTTTGCTCAAGCAGTTGAATCTAACGTGTCTAATAATTCTGTGTTGGAGGAGGGTGCTTCCTAA 1974 0.4119 MSTSTAPFKFLGQLIRKHWKSLDHVEMINFSTLNELEKLFGPNSYQPMLKIKEKIETIQGKERGWKVVPTFGMKPMTENSYLKQRQEMASWNSIPLHALYQVLGWLTFISWAISSYPQIILNFRRKSVVGLNLDYEIFNLTKHASYLIYNASLYFSTFIQKQYFQRYGFAQMIPVAANDVAFSTHAVIMTSIVLFQVAIYERGSQEFSKYAITIVCVVWSIAAVCFFIALSDHSWLWLISIFNSIQVCMTIIKYLPQAFMNFLRKSTDGFSIGGVLLDFSGGVFNYSQMAVQSIDQGSWVNFFGNAGKVLISLVTIFYDSVLMFQHYVVYHGKKSAGTYPKANDKTGEPLIRETSIDEVTDEQIKGLQKSCDPPLPQEQFLKRCLFEDNATFVNVSFWSMESIEPDIKRHPPEYYMQNEDQISPGAAIDVGQSQSPKASSIADSDMVIDTENECKSPNIGPVYPSQMGNDDDCLNSNISCDHNFHIEAVNGILSQESDISSVDVSSNIDVIKTEGEPSMAPQVGMEFDSEDHAYKCYSRYAVLKGFSIRKDFVNKSRVNGAVLSRRYTCYRQGYRPNKHNDNVRKSQPETRTGCLAHMTIARLPHGKFRVTDLETEHNHEFATPCTVHMLPSQRRLSFAQAVESNVSNNSVLEEGAS 657
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele06g0369 657 Pfam FAR1 DNA-binding domain 537 622 IPR004330 -
Lele06g0369 657 TIGRFAM 2A43: lysosomal Cystine Transporter 99 330 IPR005282 -
Lele06g0369 657 Gene3D - 98 230 - -
Lele06g0369 657 PANTHER CYSTINOSIN 91 335 IPR005282 -
Lele06g0369 657 FunFam Cystinosin homolog 99 213 - -
Lele06g0369 657 Pfam PQ loop repeat 239 294 IPR006603 -
Lele06g0369 657 Pfam PQ loop repeat 100 156 IPR006603 -
Lele06g0369 657 SMART ctns 252 283 IPR006603 -
Lele06g0369 657 SMART ctns 113 144 IPR006603 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele06g0369 Lele-ChrLele06 2263049 2269901 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Lele06g0369 FAR1 1.4e-20 CL0274