Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele06g0365 ATGGCCTCTTATCTTTCGCTCTTTCTTCTTCTCTCTGCTCTCTCCCTTTTCTCACTTGTTTCCTCCTCAGCAGTGCCACGCCCTGACCTAGTTGCCCAGGACGTTCACAGGAGAATCAATGCGTCTAGAAGAAACCTGGGTTATTTATCTTGCGGAACCGGGAACCCCATTGATGACTGCTGGCGTTGTGACTCCAACTGGGAGAAAAACCGGCAAAGGCTAGCCGATTGCGCCATTGGCTTCGGTAAGGATGCCGTTGGAGGTAGAAACGGCCGAATCTACGTCGTCTCGGACTCCGGGGACGACGACCCGGTGAACCCCAAGCCAGGCACTCTCAGACACGCCGTTATACAGGAGGAGCCACTGTGGATCATCTTCAACAGAGACATGGTGATCAATCTGAAGCAAGAGCTTATCATGAACTCCTTCAAGACCATCGACGGAAGAGGGGCCAGCGTTCACATCGCCGGCGGCGGCTGCATTACCATCCATTACGTCAACAACAGAATGCCGAGGTGCAGGCACGGGTATTTTCACGTAGTGAACAACGATTACACTCACTGGGAAATGTACGCCATTGGAGGAAGCGCCGATCCTACCATTAACAGCGAAGGGAATAGGTTTCTTGCTCCTGATAATAGTGCTAGCAAAGAAGTGACGAAGCACGAGGATGCTCCTGAGAGCGAGTGGACCAACTGGAATTGGAGATCAGAAGGTGATCTTTTCTTGAACGGCGCATTCTTCAAGCAGTCTGGTGCTGCATCTTCTTCACCCTATGCTAGGGCGTCAAGTCTCAGTGCTAGGCCTTCTTCTCTGGTTGGTTCTATCACAGTCAGCGCTGGTGCACTTATCTGCAGAAAGGGCACTCGTTGCGGATAA 879 0.5199 MASYLSLFLLLSALSLFSLVSSSAVPRPDLVAQDVHRRINASRRNLGYLSCGTGNPIDDCWRCDSNWEKNRQRLADCAIGFGKDAVGGRNGRIYVVSDSGDDDPVNPKPGTLRHAVIQEEPLWIIFNRDMVINLKQELIMNSFKTIDGRGASVHIAGGGCITIHYVNNRMPRCRHGYFHVVNNDYTHWEMYAIGGSADPTINSEGNRFLAPDNSASKEVTKHEDAPESEWTNWNWRSEGDLFLNGAFFKQSGAASSSPYARASSLSARPSSLVGSITVSAGALICRKGTRCG 292
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele06g0365 292 Gene3D - 54 165 IPR012334 -
Lele06g0365 292 Gene3D - 166 284 IPR012334 -
Lele06g0365 292 SUPERFAMILY Pectin lyase-like 33 168 IPR011050 -
Lele06g0365 292 SMART amb_all 29 214 IPR002022 -
Lele06g0365 292 SUPERFAMILY Pectin lyase-like 163 291 IPR011050 -
Lele06g0365 292 PRINTS Pollen allergen Amb family signature 101 126 IPR018082 -
Lele06g0365 292 PRINTS Pollen allergen Amb family signature 77 94 IPR018082 -
Lele06g0365 292 PRINTS Pollen allergen Amb family signature 137 153 IPR018082 -
Lele06g0365 292 PANTHER PECTATE LYASE 18-RELATED 35 168 IPR045032 GO:0030570
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele06g0365 Lele-ChrLele06 2244265 2245590 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele06g0365 168 291 Polysaccharide Lyase AT4G24780 79.032 3.95e-60 195