Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele06g0336 ATGGAGAAACAGGTCGTCGTTGAGAACCTATGGAAGGGTGAGAGAGAAGCTCAGATTCAAGCAGCAATGGAGCTCACTAGATTAAGCACCAAGCAGAGACACAAGTTGGCAGAAAATGGAATAATGGTTCCTCTGATTTCCATGCTTCATTCTCAAGACCATGAAGCCATTGAAGCTTCTCTCTGTGCTCTGCTCTGTCTTGCCTTTGGCAGTGAACGAAACAAGATTCGGATCGTCAAGTCTGGAGTTTTACCAGTGTTATTGAATCTCCTCCAATGCGAAAGCCAACCACTCATAGAACTAACAATAGCTGCAATGCTAACCCTTTCTTCTTGCAAAGCAAATAAGCTCGCAATAGCTTCATCTGGGGCTATCCAATTACTAATACAAATTCTCAATGGCGATTATGAAAACTGCATAAACACCCAATCCCTTCTTGACGCCATAGCCACTCTTCATAACCTCTCAACCTGTAAAGAGATAACACCATTGCTAGTTTCTTCTGGTATAACAATGTCCTTACTTGAACTGATTCACAACTCAGGAAAATCAAGTGAGACAGCAGAGAAAGCAATTGGGTTACTGGAAAACATGGTGTATTCATCAGAGATAGCATTAAGCGAAGCTGCAAGCATAGGAGGGGCCATAAGGATAGTGGTAGAGACAATTGAAGAAGGTTCCCTGATAGGGAAAGAGCATGCTGTGGGGATTCTGCTTCTGACATGCAAAAGTTGCAGAGAGAAATACAGAGGAATGATACTGAGAGAAGGAGTCATGCCTGGTTTGCTTCAGTTAAGTGTGGATGGAACACAAAGAGCTAAAGGGATGGCTAGAGAATTGTTATTGCTTCTGAGGGATTGTTCTAATAATTATGGTTCAGCAAGTGGTAAGCAGATGAATCATGTGATAATAGAACAGATAATGCAGGAGATTGATGAAGAAGGTGAGGAATTGGCTGGGAGTACTTTGAGATTGGTGGAGGAGATGATTGCAAAGCTTCATACATGA 1008 0.4226 MEKQVVVENLWKGEREAQIQAAMELTRLSTKQRHKLAENGIMVPLISMLHSQDHEAIEASLCALLCLAFGSERNKIRIVKSGVLPVLLNLLQCESQPLIELTIAAMLTLSSCKANKLAIASSGAIQLLIQILNGDYENCINTQSLLDAIATLHNLSTCKEITPLLVSSGITMSLLELIHNSGKSSETAEKAIGLLENMVYSSEIALSEAASIGGAIRIVVETIEEGSLIGKEHAVGILLLTCKSCREKYRGMILREGVMPGLLQLSVDGTQRAKGMARELLLLLRDCSNNYGSASGKQMNHVIIEQIMQEIDEEGEELAGSTLRLVEEMIAKLHT 335
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele06g0336 335 SUPERFAMILY ARM repeat 6 318 IPR016024 -
Lele06g0336 335 FunFam U-box domain-containing protein 4 206 324 - -
Lele06g0336 335 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 169 203 IPR000225 GO:0005515
Lele06g0336 335 FunFam U-box domain-containing protein 4 4 202 - -
Lele06g0336 335 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 123 170 IPR000225 GO:0005515
Lele06g0336 335 SMART arm_5 71 111 IPR000225 GO:0005515
Lele06g0336 335 SMART arm_5 29 69 IPR000225 GO:0005515
Lele06g0336 335 SMART arm_5 158 200 IPR000225 GO:0005515
Lele06g0336 335 SMART arm_5 112 157 IPR000225 GO:0005515
Lele06g0336 335 Gene3D - 4 332 IPR011989 -
Lele06g0336 335 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 82 124 IPR000225 GO:0005515
Lele06g0336 335 PANTHER U BOX DOMAIN-CONTAINING 6 287 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele06g0336 Lele-ChrLele06 2099766 2101238 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele06g0336 6 286 U-box Gene Family AT3G54790 32.517 6.86e-25 103