Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele06g0334 ATGGAGTCAGCTGTGAACGGAGTCGAGTCTATATCAGAGCTTCAGAAGTCAGTTTCGGCACAAGATCATGACTCTCCTTCAACATCTGAAACTCCAAAATCTTCTTCCTTGCCTCCTTTAAGAGCATCATCAAGAAATTACGGAATTAAGATTCAACAAAAGCATCCTTATCAGGAAACCAACCAAGAACTCCCAAATACGTCCAAGCAACATCACAATTCTAGTGAGAAGTCAGGAGAAATTAGTTCAGGGAAGAATATATCTATGATGGAGACAAAGAATTATGAAGCAAAAGGCATATCAGCCCCATGTAAAGGAGTTGTAATTGATCAAACAAAGAGTTGCTCTCAGTCAGATTTAACGTTTTGTGCAAGTCCTCAGAATAGCTTCTATTCTGCTGCGGCTACCTATTCAGAAGCCAAACAAAGTTTCGACAATACTGAAGTCAGTGAGTGTGTTAGTGTGGATAAGTCAGGTGAAAGTGGTGAAGCCACAAACTCTTGTGACTTCAATGAAAGCAGGAAGACCAGCATCTGTAGAGGGAGTACTGGGAGTGATGTGAGTGATGAAAGCAGCACCAGTAGTTTGAGCAGTGCTTTGTATAAACCTCACAAGGCTAATGATATAAGATGGGAAGCGATTCAAGCCGTGCGAACACGTGATGGGGTGCTGGAAATGAGGCATTTCAGGTTGTTGAAGCAATTGGGATGTGGCGACATAGGAAGTGTGCATCTTGCAGAGTTGAGCGGCACAAGGACAGGTTTTGCAATGAAGATAATGAACAAAACAGAGCTGGCTAGTAGGAAGAAGCTTCTGAGAGCTCAGACAGAGAGAGAGATCTTGCAGTCCCTGGATCACCCTTTTTTGCCCACGTTATATACACATTTTGAGACAGAGACGTTCTCTTGCTTGGTAATGGAGTTTTGCCCTGGTGGGGACTTGCATGCGCTCAGGCAAAGACAGCCTAGGAAGTATTTCTCGGAGCATTCTGCCAGGTTTTATGTAGCAGAAGTTCTTCTTGCTTTGGAATACCTTCACATGCTTGGGATCATCTACAGAGACCTCAAACCAGAGAACGTGTTGGTGCGGGAAGACGGTCACATAATGCTCTCAGACTTCGACCTCTCTCTGCGTTGCGCCGTGAGTCCCACTCTCGTAAAATCCTCAAACTCAACCCTAGACGGAAGAACTTCTGGATACTGCATTCAACCAACCTGCATCGAACCGACCTGCGTGCTTCAGCCAGATTGCATCCAACCCTCCTGTTTCACGCCTCGATTTCTATCAGGCAAAAAGAAAGACAAAAAGTCGAAACCAAAGAACGAAACGCCTCACCAGGTGACGCCTCTCCCGGAGCTCATCGCCGAACCCACAAACGCCCGTTCCATGTCCTTCGTAGGCACGCACGAATACTTAGCACCCGAAATCATCAAAGGCGAAGGCCACGGGAGTGCAGTAGACTGGTGGACGTTCGGGATATTCTTGTACGAGCTTTTGTTCGGAAGAACGCCATTCAAGGGGTCGGCGAACAGAGCGACTCTGTTCAACGTGGTGGGGCAGCCATTGAGGTTTCCAGAATCACCCGGCGTTAGCTTCGCTGCTAGGGATTTGATCAGAGGATTGCTCGTGAAAGAGCCTCAACATCGTCTGGCTTATAGACGAGGAGCAACGGAGATCAAACAGCACCCATTCTTTCAGAACGTGAATTGGGCGCTGATACGGTGTGCGAACCCTCCGGAGGTTCCAAGGATGGTGGCCCTGAAAGAGATGTCGGCGGCTCAGAAAGTGCCCGGCGTTAAGCCTGCCGGTAACTATTTAGATATTGATTTCTTTTGA 1836 0.4728 MESAVNGVESISELQKSVSAQDHDSPSTSETPKSSSLPPLRASSRNYGIKIQQKHPYQETNQELPNTSKQHHNSSEKSGEISSGKNISMMETKNYEAKGISAPCKGVVIDQTKSCSQSDLTFCASPQNSFYSAAATYSEAKQSFDNTEVSECVSVDKSGESGEATNSCDFNESRKTSICRGSTGSDVSDESSTSSLSSALYKPHKANDIRWEAIQAVRTRDGVLEMRHFRLLKQLGCGDIGSVHLAELSGTRTGFAMKIMNKTELASRKKLLRAQTEREILQSLDHPFLPTLYTHFETETFSCLVMEFCPGGDLHALRQRQPRKYFSEHSARFYVAEVLLALEYLHMLGIIYRDLKPENVLVREDGHIMLSDFDLSLRCAVSPTLVKSSNSTLDGRTSGYCIQPTCIEPTCVLQPDCIQPSCFTPRFLSGKKKDKKSKPKNETPHQVTPLPELIAEPTNARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGRTPFKGSANRATLFNVVGQPLRFPESPGVSFAARDLIRGLLVKEPQHRLAYRRGATEIKQHPFFQNVNWALIRCANPPEVPRMVALKEMSAAQKVPGVKPAGNYLDIDFF 611
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele06g0334 611 ProSitePatterns Serine/Threonine protein kinases active-site signature. 350 362 IPR008271 GO:0004672|GO:0006468
Lele06g0334 611 Pfam Protein kinase domain 462 565 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele06g0334 611 Pfam Protein kinase domain 230 382 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele06g0334 611 MobiDBLite consensus disorder prediction 175 194 - -
Lele06g0334 611 ProSiteProfiles Protein kinase domain profile. 229 565 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele06g0334 611 PANTHER FLIPPASE KINASE 1-RELATED 54 588 - -
Lele06g0334 611 Gene3D Transferase(Phosphotransferase) domain 1 313 412 - -
Lele06g0334 611 Gene3D Transferase(Phosphotransferase) domain 1 459 583 - -
Lele06g0334 611 Gene3D Phosphorylase Kinase; domain 1 228 312 - -
Lele06g0334 611 FunFam serine/threonine-protein kinase D6PK-like 460 583 - -
Lele06g0334 611 FunFam Serine/threonine-protein kinase D6PK-like 227 312 - -
Lele06g0334 611 MobiDBLite consensus disorder prediction 1 72 - -
Lele06g0334 611 MobiDBLite consensus disorder prediction 1 87 - -
Lele06g0334 611 FunFam serine/threonine-protein kinase D6PK-like 313 380 - -
Lele06g0334 611 CDD STKc_phototropin_like 227 583 - -
Lele06g0334 611 SMART serkin_6 229 565 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele06g0334 611 MobiDBLite consensus disorder prediction 429 448 - -
Lele06g0334 611 SUPERFAMILY Protein kinase-like (PK-like) 206 584 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele06g0334 Lele-ChrLele06 2088386 2091126 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele06g0334 127 611 AGC Kinase Gene Family AT5G47750 70.400 0.0 701
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_RSK-2 Lele06g0334 Pkinase 1.1e-36 CL0016