Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele06g0319 ATGGCTTCTTCTTCTTCAAGCTACTCAAATTCTCCATGTGCTGCGTGCAAGTTTCTGAGGAGGAAATGCATGCCAGACTGCATATTCGCGCCATATTTCCCACCAGAGGAACCTCAAAAGTTTGCAAATGTTCACAAAATATTCGGAGCCAGCAACGTGAGCAAGCTGCTAAACGAAGTTCAGCCTCATCAGAGAGAAGATGCTGTGAACTCTCTGGCTTATGAAGCTGAAGCGAGGATTAAGGATCCGGTGTATGGCTGTGTAGGGGCAATCTCCGTGCTCCAGAGGCAAGTGATTAGGCTTCAGAAAGAACTTGATGCAACTAATGCTGATTTGATTCGCTATACTTGCAATAATGAGATTCCTTTTGCAAGAAGAATGGGTGATGATCAAGGAGGTGGTTCTGGTTCAACGCCTCTTGGTCAATCTCCTTCTGACTATTATTATCCTTCTCCTTGGAATAATAATTACTAG 474 0.4409 MASSSSSYSNSPCAACKFLRRKCMPDCIFAPYFPPEEPQKFANVHKIFGASNVSKLLNEVQPHQREDAVNSLAYEAEARIKDPVYGCVGAISVLQRQVIRLQKELDATNADLIRYTCNNEIPFARRMGDDQGGGSGSTPLGQSPSDYYYPSPWNNNY 157
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele06g0319 157 MobiDBLite consensus disorder prediction 135 157 - -
Lele06g0319 157 Pfam Lateral organ boundaries (LOB) domain 12 108 IPR004883 -
Lele06g0319 157 Coils Coil 91 111 - -
Lele06g0319 157 MobiDBLite consensus disorder prediction 126 157 - -
Lele06g0319 157 ProSiteProfiles LOB domain profile. 11 112 IPR004883 -
Lele06g0319 157 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 10 118 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele06g0319 Lele-ChrLele06 1995926 1996399 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele06g0319 1 115 AS2 family AT5G63090 87.826 2.13e-70 209
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Lele06g0319 LOB 7.8e-43 No_clan