Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele06g0294 ATGGATTTTGAGCCAAACTTTCATGAGAGTTTCTCTCTGCTTTCTGGGCTTTTCCCGGAAAATCCGCCAAAGTCTCAACCACTTTCACTCGCAATGTCACACATTCAACCTCCTCCTTCCCAGGTTAATCCGCCATTGATTTTTCCCACCGACCAAAATTTCCACCATTTTCAACACTACCCTCAGCTGGATCTGAACGGGTCAAACCCGAACCCGATATTGTCGAAGGATGCTCCATCTTCTTCCTTCAATATCCCTTTCTTTCACCCGGCGACTCTTCCTTTTGATTCCGCCTTCCCAAACGAGCCCTTCAAAATCGACGCCGCCTTGCATGGCCGCCACAGTACTGGTCGGGCCTTCTGGGATTTCTCGAACAAGCTCTCTCTTCCATCTGATTCACCCTTGGCCTCACACATGGGCCCATCCCTGTCACCATTGTTCCATCAAGCTTATGGATCACCATTGAAGCCTAAGCTTCAGGACGAACTTTTTCTGTTTTTCCCTGAGAATAATAACCAGTGGGAACACAAAGCTCTTGCTGATCACAGGGAAGATGACAGGAACAAGAAGCTGCAGATGCGTAAAGGTGGTGGTATTCAGAAGAACACCAATATCATCAAAGGACAATGGACACCAGAAGAAGACAGAATGTTGGTGCAATTGGTGGAGCGGTTTGGGATAAAAAAATGGTCGCAAGTGGCAAAGGCTTTGAATGGAAGGGTGGGAAAGCAGTGTAGGGAGAGGTGGCACAATCATCTGCGTCCGGACATTAGGAAGGAGGCATGGACGGAGGACGAGGACATGATCCTGATCGAAGCCCACAAGGAAGTAGGCAACAAGTGGGCCGAAATCGCTCGTAGGCTTCCCGGAAGGACGGAAAACACCATCAAGAACCACTGGAACGCTACAAAGCGCCGCCAGAACGCCAAGAAGCACAGAAACAAGGGACCCACATCGAGGCCTTCACTTCTTCAGGAATACATCAAGCAAGTCACTTCGGGCCAAGGAACCTCAAGGCGGCCTCAGATCAAACAAGAACGCGCCGATGACGACGACGACGACGAGGAGCTGGTCTGCTACAACAACAATCCCATGAGCAACGTCAGAGTTCGCTACGAAAGCGCCTCGGATGATGAAGACTCCAGCTCTGGAGACTGGGAGGTTGAGATGTATGAGCCGGCGGAGGGAGACGCCGGCGCCGACGTGGATGATCAGGAGACGGCGTGTGAGAATAATAATGGAGAAGAAGAGGTTGCGGCAGAGATGAACGTGTTTGCGGGAGAGGAGGGGATGAAGAAAGAGATGGATCTGATGGACATGATATATAGTCCCGGCAAATACTGA 1344 0.5067 MDFEPNFHESFSLLSGLFPENPPKSQPLSLAMSHIQPPPSQVNPPLIFPTDQNFHHFQHYPQLDLNGSNPNPILSKDAPSSSFNIPFFHPATLPFDSAFPNEPFKIDAALHGRHSTGRAFWDFSNKLSLPSDSPLASHMGPSLSPLFHQAYGSPLKPKLQDELFLFFPENNNQWEHKALADHREDDRNKKLQMRKGGGIQKNTNIIKGQWTPEEDRMLVQLVERFGIKKWSQVAKALNGRVGKQCRERWHNHLRPDIRKEAWTEDEDMILIEAHKEVGNKWAEIARRLPGRTENTIKNHWNATKRRQNAKKHRNKGPTSRPSLLQEYIKQVTSGQGTSRRPQIKQERADDDDDDEELVCYNNNPMSNVRVRYESASDDEDSSSGDWEVEMYEPAEGDAGADVDDQETACENNNGEEEVAAEMNVFAGEEGMKKEMDLMDMIYSPGKY 447
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele06g0294 447 ProSiteProfiles Myb-like domain profile. 254 304 IPR001005 -
Lele06g0294 447 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 258 308 IPR017930 -
Lele06g0294 447 SUPERFAMILY Homeodomain-like 204 300 IPR009057 -
Lele06g0294 447 MobiDBLite consensus disorder prediction 301 356 - -
Lele06g0294 447 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 202 257 IPR017930 -
Lele06g0294 447 CDD SANT 261 304 IPR001005 -
Lele06g0294 447 CDD SANT 210 253 IPR001005 -
Lele06g0294 447 MobiDBLite consensus disorder prediction 303 317 - -
Lele06g0294 447 FunFam Transcriptional activator Myb isoform A 206 259 - -
Lele06g0294 447 MobiDBLite consensus disorder prediction 318 341 - -
Lele06g0294 447 Pfam Myb-like DNA-binding domain 210 267 - -
Lele06g0294 447 SMART sant 206 255 IPR001005 -
Lele06g0294 447 SMART sant 258 306 IPR001005 -
Lele06g0294 447 Gene3D - 206 258 - -
Lele06g0294 447 ProSiteProfiles Myb-like domain profile. 202 253 IPR001005 -
Lele06g0294 447 Gene3D - 260 326 - -
Lele06g0294 447 PANTHER MYB PROTEIN-RELATED 182 323 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele06g0294 Lele-ChrLele06 1771640 1773657 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele06g0294 201 334 MYB Transcription Factor Family AT4G18770 69.630 2.12e-63 209
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Lele06g0294 Myb_DNA-bind_6 3.5e-18 CL0123