Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele06g0278 ATGGAGCATGTAGCAGAAAAAAGATTTCCTCTCAATGCGGAAGATTATAATTTATATGAAGAAGTTGGTGAAGGCGTTAGTGCCACTGTGTATAGGTCACTCTGTGTGCCACTCAACAAAATAGTTGCCATCAAGGTTCTTGATCTCGAAAAGTGCAATAATGATTTGGATGGCATCAGGCGAGAGGTACAAACGATGAGCTTGATTGCTCATCCAAATCTTTTACGGGCATATTGTTCTTTTACTGCTGGACACAACCTTTGGGTTGTGATGCCCTACATGTCTGGGGGATCCTGCCTTCATATAATGAAATCTGACTATCCTGAGGGATTTGAAGAGGCTGTTATTGCTACTTTATTGCGGGAGGTTCTCAAAGCTCTTGTCTATCTTCATGCTCATGGACACATACATAGAGATGTAAAGGCCGGTAATATTTTGATTGATTCTGATGGTATGATCAAATTAGCTGACTTTGGGGTGTCAGCATGTATGTTTGATGCTGGAGATAGGCAACGATCAAGAAATACTTTTGTTGGAACTCCTTGCTGGATGGCTCCTGAAGTTATGCAACAATTACATGGATATGACTTCAAGGCAGATATTTGGTCACTTGGTATAACAGCGCTTGAACTTGCTCATGGTCATGCCCCATTTTCCAAGTATCCACCAATGAAAGTTTTGCTAATGACGTTACAAAATGCTCCTCCAGGCCTTGATTATGAAAGAGACAGGAGATTTTCTAAGTCGTTCAAAGATATGGTAGGAACCTGCCTAGTGAAGGACCCAAAGAAACGTCCGACTTCGGAAAAACTTTTAAAACACCCTTTCTTCAAACATGCCCGCTCATATGAATACCTAACTCGAACTATTCTAGATGGCCTTGCACCTCTAGGAGATCGTTTTAGGATGTTGAAGGCAAAAGAGGCTGATTTATTGGTGCAGAATAAGGCTCTTTACGAGGATAAAGAACAGCTATCGCAGAAAGAATATATTCGAGGAATCAGTGCATGGAATTTCAACCTTGAGGATTTAAAAAGTCAAGCTGCTCTCATTCAAGATGATGACATGTCAAATGCAGAAGAGCCAGATAAGGATAAGAAGCTAAAAAACAAATATGATGATAATGGGGTTCCTGCAGAAGGGTCATTGGCAGTACCAACTAACGATTTAGATGCTAAACCCACATTGGATAAGGAGGATGGGTTCAGTGATCTTCAGGATTTGGAGAGTTCGCTTGCTTCATTTCCAATTAAACCTCTTGAAGCACTAAAAGGTTGTTTTGACATTTGTGAGGATGATGCAAATAACACTAGTCTGAGGGATTTGGACCAGGATTATGGAAGAAACGAGAATGGAAGTTCTGGGCTTAGTTCAGTGCCACAAAATGCTTTAACTGAGCATAAAAAGTATTTGAGTGGTTCCTTGGTCCCTGATAATTCTCTTTCCCCTAAAAAGGTTGTTACTGATGGGGACAGGGATTATCTGCAAGCAAAATATAATTCTGATCGGAATCATAGTGGTCCATTGTTATATCGTCAGAAGAGAGACACCAACAACAACCTTGCATCCGTTGATGATGCGTCAGAAAGAGCAGTCATCCAGCGTAAGGGACGGTTTAAGGTTACTTCAGCAGATCTCAGTCCTAAGGGTCCTTCAAACTGCACTTTTGGCCCGGTTTCTGGAGGTTCTTTTGGTCTCCCAAATCAGAACTCTACAGTTGCTTCCATTCTTCCATCCCTGCAGTCCATTTTGCAACAGAACAGCAGGCAAAGGGAAGAAATTATTAAATTAATAAAGTATGTGGAGCAATCTTGTGGCAAGAATACTGAATCAGCAGAGGCAGGGATAGTTGATCTTTTGCAGGTACCACCTGCAACAAATAGGGAAAGAGAGCTGTATTCGCAAGTGATTCAGTTACAACAAAGTATTGGGAGTCTTGATGAGGAAGTTCAAAGACAAAAGATGAAAAATGCCCAGTTAGAGAAGCAGTTGAACTCTATGGCCAACAGAGTGGAAGAGTGA 2022 0.413 MEHVAEKRFPLNAEDYNLYEEVGEGVSATVYRSLCVPLNKIVAIKVLDLEKCNNDLDGIRREVQTMSLIAHPNLLRAYCSFTAGHNLWVVMPYMSGGSCLHIMKSDYPEGFEEAVIATLLREVLKALVYLHAHGHIHRDVKAGNILIDSDGMIKLADFGVSACMFDAGDRQRSRNTFVGTPCWMAPEVMQQLHGYDFKADIWSLGITALELAHGHAPFSKYPPMKVLLMTLQNAPPGLDYERDRRFSKSFKDMVGTCLVKDPKKRPTSEKLLKHPFFKHARSYEYLTRTILDGLAPLGDRFRMLKAKEADLLVQNKALYEDKEQLSQKEYIRGISAWNFNLEDLKSQAALIQDDDMSNAEEPDKDKKLKNKYDDNGVPAEGSLAVPTNDLDAKPTLDKEDGFSDLQDLESSLASFPIKPLEALKGCFDICEDDANNTSLRDLDQDYGRNENGSSGLSSVPQNALTEHKKYLSGSLVPDNSLSPKKVVTDGDRDYLQAKYNSDRNHSGPLLYRQKRDTNNNLASVDDASERAVIQRKGRFKVTSADLSPKGPSNCTFGPVSGGSFGLPNQNSTVASILPSLQSILQQNSRQREEIIKLIKYVEQSCGKNTESAEAGIVDLLQVPPATNRERELYSQVIQLQQSIGSLDEEVQRQKMKNAQLEKQLNSMANRVEE 673
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele06g0278 673 MobiDBLite consensus disorder prediction 500 517 - -
Lele06g0278 673 SUPERFAMILY Protein kinase-like (PK-like) 13 303 IPR011009 -
Lele06g0278 673 Coils Coil 643 673 - -
Lele06g0278 673 MobiDBLite consensus disorder prediction 352 402 - -
Lele06g0278 673 Pfam Protein kinase domain 16 277 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele06g0278 673 MobiDBLite consensus disorder prediction 498 517 - -
Lele06g0278 673 FunFam serine/threonine-protein kinase BLUS1 isoform X1 97 330 - -
Lele06g0278 673 ProSiteProfiles Protein kinase domain profile. 16 277 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele06g0278 673 SMART serkin_6 16 277 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele06g0278 673 Gene3D Transferase(Phosphotransferase) domain 1 97 304 - -
Lele06g0278 673 ProSitePatterns Protein kinases ATP-binding region signature. 22 45 IPR017441 GO:0005524
Lele06g0278 673 MobiDBLite consensus disorder prediction 357 374 - -
Lele06g0278 673 CDD STKc_OSR1_SPAK 14 277 - -
Lele06g0278 673 MobiDBLite consensus disorder prediction 441 461 - -
Lele06g0278 673 PANTHER SERINE/THREONINE-PROTEIN KINASE FRAY2 6 654 - -
Lele06g0278 673 FunFam Serine/threonine-protein kinase BLUS1 5 93 - -
Lele06g0278 673 Gene3D Phosphorylase Kinase; domain 1 5 92 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele06g0278 Lele-ChrLele06 1666506 1674641 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele06g0278 1 670 MAP Kinase Kinase Kinase Kinase AT5G14720 66.570 0.0 954
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE20-Fray Lele06g0278 Pkinase 1.3e-60 CL0016