Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele06g0269 ATGGGGTGGCGGGATCAACGGCTTTTGGAAGCGAAAAGAGGAGCAGGCAATGCTCCGATGACAGGGAAGAAAGAAAGTAAGAAGCAAAGGAGGATTCCATTCGATTCGATCCATCTTGGGATTGAAGAAAGTAAGGAGGAGGCAGGGAAGCGTAAAGGGAGGAGAAGTGGTGGGGGGAGGGATTCTGTGAAAGTGCGGATATTGAAGTCACCTCGAATTACAGTACTGGGCCTCTACACAGCCTATTTCCTTTCCCTGTCTTCTGATCCCAAGCTGTTGGAACTTTCAAAGAAGAGAATGCTCGGCACAAATCAAATCACCATGATTCTTTATGCGGTCAGGAACAAGTGTGCGGCATGCTTTAGGCAGTTCAACAAGTTGGAGCACTTAGTTGAGCACATGAGGATATCATATCATTCGGTTCACGAACCCACCTGTCCATTACCAAAACAGGAATGCAGAGATATTTTTGCCAACCGAGGATGCAGGTTTTGCTTGAAGGTTGTTGCACTTGCTTGCAAAATGGTGGGAGGTGGCAGTGATGGCTCACTTGATCTCTGTGCAAGGGTCTGCATAATAGATGACCACGAAAACATCATATTCCATTCTTACGTGAAGCCTCCAATTCCTGTCACAAACTACAGGTACGAGACAACAGGTATTCGACCCGAATACTTGAGGGATGCAATGACGATGAGGCAAGTGCAGAGGAAGGTTCAAGACTTCCTCTGCAACGGCGAACCCATGTGGAAGATTCGACCAAAGTGCGGGAGGGCCAGGATTCTTGTTGGGCATGGGTTAGATCATGACCTGGAGTCTCTGCAAGTGGAATATCGGGCAGAAATGATGAGGGACACTGAAAAATACCCTCCATTGATGAAAACAAGTAAGCTGAGCAACTCCCTCAAGTACGAGATACAGACAGGGATACAGGACCCGTACGAGGATTGTGTGGCAACGATGAGGCTGTACATGAGGATGAGATTCCAAGCGCACAGAAGAGAGGATTATCCGTTGGCTTCAGAGCCTCAAAATAAGAACAACTTTGCTTCGTGGAGGCAAAGAGATCTTGAGAGAATGAGCCCAGATCAAATGCTTGCTATCTCCAGGTTGACTGTTGAGGCTGTGGCATGTGGGATAATGAGACTTGAGTACATGTTTAAGGGGCGGTCTGAATTAGTCGTACCGAAATGA 1194 0.474 MGWRDQRLLEAKRGAGNAPMTGKKESKKQRRIPFDSIHLGIEESKEEAGKRKGRRSGGGRDSVKVRILKSPRITVLGLYTAYFLSLSSDPKLLELSKKRMLGTNQITMILYAVRNKCAACFRQFNKLEHLVEHMRISYHSVHEPTCPLPKQECRDIFANRGCRFCLKVVALACKMVGGGSDGSLDLCARVCIIDDHENIIFHSYVKPPIPVTNYRYETTGIRPEYLRDAMTMRQVQRKVQDFLCNGEPMWKIRPKCGRARILVGHGLDHDLESLQVEYRAEMMRDTEKYPPLMKTSKLSNSLKYEIQTGIQDPYEDCVATMRLYMRMRFQAHRREDYPLASEPQNKNNFASWRQRDLERMSPDQMLAISRLTVEAVACGIMRLEYMFKGRSELVVPK 397
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele06g0269 397 MobiDBLite consensus disorder prediction 23 62 - -
Lele06g0269 397 SMART exoiiiendus 167 333 IPR013520 -
Lele06g0269 397 MobiDBLite consensus disorder prediction 1 62 - -
Lele06g0269 397 CDD REX4_like 169 324 IPR037431 GO:0006364|GO:0008408
Lele06g0269 397 Pfam Exonuclease 188 298 IPR013520 -
Lele06g0269 397 SUPERFAMILY Ribonuclease H-like 181 328 IPR012337 -
Lele06g0269 397 Gene3D - 166 343 IPR036397 GO:0003676
Lele06g0269 397 ProSiteProfiles Zinc finger C2H2 type domain profile. 115 144 IPR013087 -
Lele06g0269 397 FunFam RNA exonuclease 4 165 343 - -
Lele06g0269 397 ProSitePatterns Zinc finger C2H2 type domain signature. 117 139 IPR013087 -
Lele06g0269 397 PANTHER RNA EXONUCLEASE REXO1 / RECO3 FAMILY MEMBER-RELATED 94 351 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele06g0269 Lele-ChrLele06 1617004 1624754 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele06g0269 112 370 C2H2 Transcription Factor Family AT5G40310 59.581 3.98e-141 404