Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele06g0262 ATGAAGGAGAAGAGCGAAAGCGGGGGTGGAGGGTATGTGAGAGCGGATCAGATAGATCTGAAGAGCTTGGACGAACAGCTTCAGAGGCATCTGACGAGAGCATGGACGATGGAGAAGAACAAGAACAAGAGAGAAGAAGAGGAGAGTGGAGGGAGGTCTACTCAAACGAGGCAAGAATGGGAGATTGAACCTTCTAAGCTCATCGTCAAGAGCGTCATTGCTCGCGGCACCTTTGGCTCCGTTCACCGTGGCATTTATGACGGCCAAGATGTTGCAGTGAAGCTCCTTGACTGGGGAGAAGAGGGCCATAGGTCAGAAGCGGAAATAGCTTCTCTGAGAGCAGCTTTTACGCAAGAAGTTGCTGTTTGGCACAAGCTTGACCATCCTAATGTAACAAAGTTCATTGGAGCAACAATGGGGTCATCAGATCTACACATACAAATGGAAAATGGTCATATAGGAATGCCAAGTAATATTTGCTGTGTTGTTGTTGAGTATTGTCCTGGGGGTGCACTCAAGTCTTACCTCATCAAAAACAGGAGAAAGAAGCTGGCATTTAAAGTGGTTGTCCAACTGGCACTTGATCTTGCAAGAGGGTTGAGCTATCTCCACTCACAGAAGATTGTCCACAGAGATGTCAAAACAGAAAACATGCTTTTAGACAAGACACGAACCTTGAAAATAGCCGACTTTGGAGTAGCTCGTATTGAGGCTTCTAATCCTCATGACATGACCGGCGAAACTGGAACTCTTGGTTACATGGCTCCTGAGGTTCTAAACGGTAATCCATATAACAGAAAGTGTGATGTGTATAGTTTTGGTATATGCTTATGGGAGATATACTGCTGCGACATGCCATATCCTGACCTTAGCTTTTCAGAAGTGACGTCAGCTGTTGTCCGCCAGAATCTGAGACCAGAGATACCTCGGTGTTGCCCAAGTTCTCTGGCAAATGTAATGAAGAGATGCTGGGATGCGAATCCTGACAAGCGACCAGAGATGGATGAGGTGGTGACAATGTTGGAAGCCATAGACACTTCAAAGGGCGGAGGTATGATCCCTCATGATGAGCCCCAAGGTTGTCTTTGTTTCAGAAGATATCGAGGACCTTGA 1113 0.4654 MKEKSESGGGGYVRADQIDLKSLDEQLQRHLTRAWTMEKNKNKREEEESGGRSTQTRQEWEIEPSKLIVKSVIARGTFGSVHRGIYDGQDVAVKLLDWGEEGHRSEAEIASLRAAFTQEVAVWHKLDHPNVTKFIGATMGSSDLHIQMENGHIGMPSNICCVVVEYCPGGALKSYLIKNRRKKLAFKVVVQLALDLARGLSYLHSQKIVHRDVKTENMLLDKTRTLKIADFGVARIEASNPHDMTGETGTLGYMAPEVLNGNPYNRKCDVYSFGICLWEIYCCDMPYPDLSFSEVTSAVVRQNLRPEIPRCCPSSLANVMKRCWDANPDKRPEMDEVVTMLEAIDTSKGGGMIPHDEPQGCLCFRRYRGP 370
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele06g0262 370 Gene3D Phosphorylase Kinase; domain 1 55 150 - -
Lele06g0262 370 ProSitePatterns Serine/Threonine protein kinases active-site signature. 208 220 IPR008271 GO:0004672|GO:0006468
Lele06g0262 370 Pfam Protein tyrosine and serine/threonine kinase 69 341 IPR001245 GO:0004672|GO:0006468
Lele06g0262 370 ProSiteProfiles Protein kinase domain profile. 67 344 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele06g0262 370 SUPERFAMILY Protein kinase-like (PK-like) 49 341 IPR011009 -
Lele06g0262 370 SMART serkin_6 67 344 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele06g0262 370 Gene3D Transferase(Phosphotransferase) domain 1 167 352 - -
Lele06g0262 370 MobiDBLite consensus disorder prediction 34 54 - -
Lele06g0262 370 PRINTS Tyrosine kinase catalytic domain signature 164 177 IPR001245 GO:0004672|GO:0006468
Lele06g0262 370 PRINTS Tyrosine kinase catalytic domain signature 202 220 IPR001245 GO:0004672|GO:0006468
Lele06g0262 370 PRINTS Tyrosine kinase catalytic domain signature 268 290 IPR001245 GO:0004672|GO:0006468
Lele06g0262 370 PRINTS Tyrosine kinase catalytic domain signature 312 334 IPR001245 GO:0004672|GO:0006468
Lele06g0262 370 MobiDBLite consensus disorder prediction 34 59 - -
Lele06g0262 370 CDD STKc_MAP3K-like 73 341 - -
Lele06g0262 370 FunFam Serine/threonine-protein kinase HT1 167 352 - -
Lele06g0262 370 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 58 344 - -
Lele06g0262 370 FunFam Kinase suppressor of Ras 1 56 151 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele06g0262 Lele-ChrLele06 1584677 1587370 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele06g0262 1 308 MAP Kinase Kinase Kinase AT3G01490 76.218 0.0 540
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-4 Lele06g0262 PK_Tyr_Ser-Thr 1e-63 CL0016