Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele06g0259 ATGGAGTCCGGCCGGCTTTTCTTCGGTTCGTCCGCTTGCCGCGGGAACATGCTGTTTCTCGGGAACGGTGATCCAGTTTATAGAGGAGGAACGATCATAAGCATGGAGGAAAGCTCAAAGAAACGACCATTTTTCAGCTCACCGGAGGAACTGTTCGATGAGGAATATTACGATGAGCAGTTGCCGGAGAAGAAGCGACGCCTCACTCCCGAGCAGGTGCTTCTGCTGGAGAAAAGCTTTGAAGAAGAGAACAAGTTGGAACCGGAAAGGAAGACCCAGCTGGCCAAGAAGCTGGGATTGCAGCCAAGGCAGGTGGCCGTGTGGTTCCAGAACCGTAGGGCCCGTTGGAAAAGCAAGCAACTTGAAAGGGATTACGATGTTCTTAAGTCTTCCTACGATGCCCTCCTTTCAAAGTACGACTCCATTGTCAAGGACAATGAAAATCTCAAATCGGAGGTGGTAGCCTTAAACCAGAAGCTTCTAGCTAAAGAGATGCCACGAGAACCATTACCAGAAGAAAAAGCAGACCCACTTATAATGGAACTAGCCCAAATGTCAACCCTGCCTTTCAACGTGAAGGTGGAGGACCGACTCAGCAGTGGGAGCGGTGGGAGTGCGGTGGTGGACGAGGATGCTCCACAGCTTGTTGTGGACAGCGTTGATTCCTACTTTCCAGCTGAGAACTTTGATGTATGCATCGCCAGAGTGGATGGAGTTCATTCGGAAGAGGAGGATGGTAGCGACGATGGTCGGAATTACTTCTCTGATGTGTTTGTGGCCCCTGAACCTGAGCACCAAAACCATGAGGAGGGAGAGGCGTTGTATTGGTGGGCGTGGAAAACTTTAATGTCGGTTTCAGAACTAGCTTCCTCAGAAAGCACCTCAAATCGTCGGTTTCCCCCCTTTTCCACCGGGTTAGTCGAAGCTGAAAGTAATCAGGGCGGGTTTATCTATTGTGCCCAGAATCAAGACAAAGAAGGCCTGGCAGGGATGTCAGAGAAAGCTCTTAGTGATAAAAATACAACTCCTGAAACTGAAAGGAAGGAGGAGAGCTCCAGTAAGGCATGTTCACATGTGGCTTCTGTTGACAATGCAGATGGAAATATTAAAGATCTGCAGAAGAAAAAAAATTGTGCTTCCGTAGTGTCTCCATCTGTCAATGGTAATCATTCAGGCGATTCTCAGATAGAAATAGTAAATGCAGAAGTAGAATACATTGATTCTGAGAACTTGAGGGATTTAGAAGATATTGACAGTTGCCTCAAGACTCTTTTGGCTGGATTGGACTCCAAGGATTGGGTCATGGTATGCAATGCCCTCAATAATGTACGGCGGATTTCAATATTTCACAAGGAAGCACTACTTGATATTCTGGGGGACGTGATCACATTTGTTGTGAAGTCCCTGAAAAGCCCTAGAAGCGCTGTATGCAAAACTGCCATTATGACATCTGCAGACATTTTCAGTGCATATAATGACCTTATAATAGATTTTCTGGATCCCCTGCTGGTGCAGCTTCTTCTCAAGTCTTCACAGGACAAGCGCTTTGTATGTGAGGCATCTGAGAAAGCCTTAATAGCTATGACTACCTGGATTTCCCCTACTTCTTTGTTGCCAAAATTGCAACCTCATCTTAAGAATAGGAATCCTCGAATCCGTGCAAAGGCTTCAATGTGCTTTTCTCGAAGTGTCCCTCGATTGGGAGCTGAGGGCATAAAGGCTTATGGGATTGACAAATTGATCCAAGTAGCTGCATCCCAGCTGAGTGACCAGCTCCCTGAATCCAGGGATGCAGCCCGAACTCTGCTACTCGAGCTTCAAAATGTATACGAGAAATTTCATGATCCCATGCCTGGTTCCGTTTCTGAGCAACCAGACGAGAAACTTCATGATCCCATGCCTGCTTCTGTTTCTGAGCAACCAGAGCCGGGTTCATGGGAGAACTTCTGTCAATCAAAGCTTTCACCGCTAAGTGCTCAAGCCGTACTTCGCGTTACCAGTATTTCTCGGGAGGGTCTTGTTTCATGA 2028 0.4719 MESGRLFFGSSACRGNMLFLGNGDPVYRGGTIISMEESSKKRPFFSSPEELFDEEYYDEQLPEKKRRLTPEQVLLLEKSFEEENKLEPERKTQLAKKLGLQPRQVAVWFQNRRARWKSKQLERDYDVLKSSYDALLSKYDSIVKDNENLKSEVVALNQKLLAKEMPREPLPEEKADPLIMELAQMSTLPFNVKVEDRLSSGSGGSAVVDEDAPQLVVDSVDSYFPAENFDVCIARVDGVHSEEEDGSDDGRNYFSDVFVAPEPEHQNHEEGEALYWWAWKTLMSVSELASSESTSNRRFPPFSTGLVEAESNQGGFIYCAQNQDKEGLAGMSEKALSDKNTTPETERKEESSSKACSHVASVDNADGNIKDLQKKKNCASVVSPSVNGNHSGDSQIEIVNAEVEYIDSENLRDLEDIDSCLKTLLAGLDSKDWVMVCNALNNVRRISIFHKEALLDILGDVITFVVKSLKSPRSAVCKTAIMTSADIFSAYNDLIIDFLDPLLVQLLLKSSQDKRFVCEASEKALIAMTTWISPTSLLPKLQPHLKNRNPRIRAKASMCFSRSVPRLGAEGIKAYGIDKLIQVAASQLSDQLPESRDAARTLLLELQNVYEKFHDPMPGSVSEQPDEKLHDPMPASVSEQPEPGSWENFCQSKLSPLSAQAVLRVTSISREGLVS 675
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele06g0259 675 PRINTS Lambda-repressor HTH signature 90 99 IPR000047 GO:0003677
Lele06g0259 675 PRINTS Lambda-repressor HTH signature 99 115 IPR000047 GO:0003677
Lele06g0259 675 Pfam Homeodomain 64 117 IPR001356 GO:0003677
Lele06g0259 675 CDD homeodomain 64 120 IPR001356 GO:0003677
Lele06g0259 675 MobiDBLite consensus disorder prediction 616 648 - -
Lele06g0259 675 SUPERFAMILY ARM repeat 408 621 IPR016024 -
Lele06g0259 675 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN 53 320 IPR045224 GO:0003700
Lele06g0259 675 ProSiteProfiles 'Homeobox' domain profile. 59 119 IPR001356 GO:0003677
Lele06g0259 675 Gene3D - 58 125 - -
Lele06g0259 675 ProSitePatterns 'Homeobox' domain signature. 94 117 IPR017970 GO:0000981|GO:0006355
Lele06g0259 675 Pfam Homeobox associated leucine zipper 119 160 IPR003106 GO:0006355|GO:0043565
Lele06g0259 675 SUPERFAMILY Homeodomain-like 64 130 IPR009057 -
Lele06g0259 675 SMART HOX_1 62 123 IPR001356 GO:0003677
Lele06g0259 675 SMART TOG_3 410 642 IPR034085 -
Lele06g0259 675 FunFam homeobox-leucine zipper protein ATHB-6-like 67 113 - -
Lele06g0259 675 Coils Coil 118 159 - -
Lele06g0259 675 MobiDBLite consensus disorder prediction 333 357 - -
Lele06g0259 675 Gene3D - 393 630 IPR011989 -
Lele06g0259 675 MobiDBLite consensus disorder prediction 339 354 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele06g0259 Lele-ChrLele06 1557113 1564748 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele06g0259 1 279 Homeobox Transcription Factor Family AT3G01470 59.170 1.06e-94 292
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-HD-ZIP Lele06g0259 CLASP_N 1.8e-06 CL0020