Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele06g0257 ATGTACAAGAGTGTAAGAACGAAGAAAACAATGTAACGAACGAGCAGGTTTTGTCCTTCCTGCTTCATTGAAGCCGATATCTGTAGAATTGCTGTTCTGGTATCAACCAATTTCAGTGGAGGTGTATGGCTCCTTATTGGAATTGTTATGGCAGTTCTATTCATAATAACTGTAACTGCATACATCTTGCTTCGTAAACTTTCCAAATCAACCCACCCCAGAAATGAAGCATTGGAGGAAGTTCTGGTGAAGGACAGTGCTTGTCCAAGAGTTCCTCTAAAGGAAGTCTACTCTGCCACCAACCATCTAAATGAAATCAATGTCATTGGTGAAGGAACTTTTGGGAAGGTTTATAAAGGTACAATGAGAAATAATCAACATGTTGCAATAAAACACATCATCAATGATGATGGAAGCATGGAGACTTTTGTCAGAGAAATTACAAACTTATCACATGTCAGACATCCAAATCTCGTCGCTTTATTGGGTTGCTGTGTTGAGGGAGATGAATGTTTCCTTGTCTATGAACTGTGCCCCAGTGGGAGCCTTTCAGAGTGGCTATTTGGCAAGAACAAGGTTCTGTCCTGGATACAGAGGCTTAATATTGCAATTGGCACTGCAAAAGGTCTTTGGTTCCTTCATACATATCCTCAAGGCTGCATCGTTCACCGTGATGTCAAGCCAACAAACATTCTCTTGGGGCCGAAGTTCGAAGCAAAGCTATCAGATTTTGGACTCTCTAAAGTTTTAGATGTGGGTGAAACATATGTTAGCTCAGAAGTGAGAGGAACTTTTGGATATGTCGATCCTGAGTACCAAAGCAACCGCCATGTAAATTCATCTGGGGATGTCTACAGCTTTGGCGTGGTACTTCTGCAGATCCTCTCTGGGAAGAAGGCTATAAATTTGAAACTCAGGAAACCCATGACTCTGAATAAAATGGCAAAAGCACTCACAAGGGATGGCAGCATAACAGAATTTGTTGATCCTAAACTTCAAGGGGAGTACTCAGAAGAAGCATTTGATTTTACCCTTCGTCTTGCTCTATCATGCACAGCCCTTAACCAACAACGTCCATCCATGGAGCAGGTTGTTACAAGACTGGAAGAGGCCCTACTAATTTCAATGAAGAAGGTTTCTGCAACAGACACTTCATTGGACAATCCTTCAATCAATTCTATGATACAGTGA 1191 0.4156 MYKSVRTKKTMXRTSRFCPSCFIEADICRIAVLVSTNFSGGVWLLIGIVMAVLFIITVTAYILLRKLSKSTHPRNEALEEVLVKDSACPRVPLKEVYSATNHLNEINVIGEGTFGKVYKGTMRNNQHVAIKHIINDDGSMETFVREITNLSHVRHPNLVALLGCCVEGDECFLVYELCPSGSLSEWLFGKNKVLSWIQRLNIAIGTAKGLWFLHTYPQGCIVHRDVKPTNILLGPKFEAKLSDFGLSKVLDVGETYVSSEVRGTFGYVDPEYQSNRHVNSSGDVYSFGVVLLQILSGKKAINLKLRKPMTLNKMAKALTRDGSITEFVDPKLQGEYSEEAFDFTLRLALSCTALNQQRPSMEQVVTRLEEALLISMKKVSATDTSLDNPSINSMIQ 396
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele06g0257 396 CDD STKc_IRAK 109 370 - -
Lele06g0257 396 Gene3D Transferase(Phosphotransferase) domain 1 179 387 - -
Lele06g0257 396 FunFam probable receptor-like protein kinase At5g59700 178 386 - -
Lele06g0257 396 Gene3D Phosphorylase Kinase; domain 1 65 177 - -
Lele06g0257 396 ProSitePatterns Protein kinases ATP-binding region signature. 109 131 IPR017441 GO:0005524
Lele06g0257 396 ProSiteProfiles Protein kinase domain profile. 103 373 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele06g0257 396 SUPERFAMILY Protein kinase-like (PK-like) 85 368 IPR011009 -
Lele06g0257 396 SMART serkin_6 103 372 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele06g0257 396 ProSitePatterns Serine/Threonine protein kinases active-site signature. 221 233 IPR008271 GO:0004672|GO:0006468
Lele06g0257 396 Pfam Protein kinase domain 105 365 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele06g0257 396 PANTHER LEUCINE-RICH REPEAT RECEPTOR PROTEIN KINASE EMS1 42 370 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele06g0257 Lele-ChrLele06 1550173 1552496 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele06g0257 31 369 Receptor kinase-like Gene Family AT1G07650 39.266 1.20e-66 224
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_URK-2 Lele06g0257 Pkinase 1e-44 CL0016