Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele06g0252 ATGTTTCATGGGTCTCCCTTTATGATCTGTGGGATGTCAGAAAGCATGTATTATAAGTGGTTTTTTAACCATACCCACTTGAAGATAGCTTGGATTAATTATCAAATCCAGAAAAAAGATGGTTACTTGAGCTATCCTCCTCCTGTTTTGCCTTCATCTTCGCCCCCATATCCCGGTGCTTTCCACAGAGAAACAGGATCTTCTTCCTCGTCTGGTATTAGAATTAGTCCGGCTGTTCTTTTCATTATAGTGATTCTAGCCGTGCTCTTTTTCATTTCTGGTCTTCTACACCTGCTTGTTAGATTTCTCATAAAGCACCCATCTTCCTCAGCATCTGAATCTAACAGACACCAAGAAATATCAACCTCCGATGCTCTTCAAAGACAACTCCAACAGCTCTTCAATCTCCATGACTCTGGTCTGGATCAAGCTTTCATTGACGCACTTCCTGTTTTCCAGTATAAAGAGATAGTTGGTCTGAAAGAACCATTTGACTGTGCTGTGTGCCTCTCTGAGTTTTCTGAGAAAGACAAGCTCAGATTGCTTCCAGTTTGCAGCCATGCCTTTCATATTAATTGTATAGACACATGGCTTCTATCCAATTCCACGTGTCCACTTTGCAGAGGAACCCTGTTAACTCCTGGGTTCTCAATTGAAAACCCCATATATGATTTTGATGATTTAAGGGAAGAGGATGGGTGTAACGGTGAAAATGGGTTCACAACTTCTAGACAGAAAACCGTTGAAATTGAAGAAACTGTAGTAGAGAAAGGAGTGTTTCCTGTAAAACTTGGTAAATTCAGAAGGCTGAATGTGGAGGCAGGGGAGGGTGGAGGAGGAGGAGGAGGAGAGACGAGTAGCAGCAATTTAGATGCAAGAAGATGTTACTCAATGGGATCTTACCAGTATGTGTTAGCCAATTCAGACCTCCGAATTGCCTTAAACCATGATGACCATCAAGACCGAGAGGTAAGGCTTACAGAAGGACCAGAAAAATCTGAGAAGCTTTCCATGGAGGAAGCAAAGAAGATTAGAAGTGTGAGTAAAGGTGAGAGCTATTCTGTTTCCAAGATCTGGCAATGGTCCAAGAAGAGCAAGTTTTCTACTTCTTCCGAAGAAGATCAAGTGGGCATGCCATCTTCGCTTAATACGGACCTGTCATGGATGAGAAGAACACAAGGCACAACATGA 1191 0.424 MFHGSPFMICGMSESMYYKWFFNHTHLKIAWINYQIQKKDGYLSYPPPVLPSSSPPYPGAFHRETGSSSSSGIRISPAVLFIIVILAVLFFISGLLHLLVRFLIKHPSSSASESNRHQEISTSDALQRQLQQLFNLHDSGLDQAFIDALPVFQYKEIVGLKEPFDCAVCLSEFSEKDKLRLLPVCSHAFHINCIDTWLLSNSTCPLCRGTLLTPGFSIENPIYDFDDLREEDGCNGENGFTTSRQKTVEIEETVVEKGVFPVKLGKFRRLNVEAGEGGGGGGGETSSSNLDARRCYSMGSYQYVLANSDLRIALNHDDHQDREVRLTEGPEKSEKLSMEEAKKIRSVSKGESYSVSKIWQWSKKSKFSTSSEEDQVGMPSSLNTDLSWMRRTQGTT 396
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele06g0252 396 CDD RING-H2_PA-TM-RING 165 208 - -
Lele06g0252 396 Pfam Ring finger domain 165 208 IPR001841 -
Lele06g0252 396 ProSiteProfiles Zinc finger RING-type profile. 166 208 IPR001841 -
Lele06g0252 396 FunFam RING-H2 finger protein ATL46 128 213 - -
Lele06g0252 396 SMART ring_2 166 207 IPR001841 -
Lele06g0252 396 PANTHER E3 UBIQUITIN-PROTEIN LIGASE RNF13-LIKE 70 359 - -
Lele06g0252 396 MobiDBLite consensus disorder prediction 320 347 - -
Lele06g0252 396 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 141 213 IPR013083 -
Lele06g0252 396 SUPERFAMILY RING/U-box 145 214 - -
Lele06g0252 396 MobiDBLite consensus disorder prediction 320 396 - -
Lele06g0252 396 MobiDBLite consensus disorder prediction 349 396 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele06g0252 Lele-ChrLele06 1518749 1519939 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele06g0252 94 374 C3H Transcription Factor Family AT2G18650 42.444 1.06e-59 197