Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele06g0247 ATGACACGAAATCCTCCCTTTTTCTCTTTGGGTTTCTCATCGGGTCAAGAAGGTGGAATTCGATTGGAATTGATGTTTCTCTTCAAGGATGAAGTTGCGATCGATTCAGTATTCAAGGGACATGGAGGGCTATGCATGTGTCGGGAGGATGGACGCGAGATCCGTGTTGGTGATTGTGCACTTTTCAAGCCACCCCAAGATTCCCCACCTTTTATTGGAATAATTCGCAAATTAACGTTGAAGAAAGAAGAGAGTCCGAGTTTAGAAGTGAATTGGCTTTATAGACCTGCTGATCTGAAGCTTGCAAAAGGGATCCAATTGGAAGCTGCGCCAAACGAGGTCTTTTACTCCTTTCACAAGGATGAAACACCTGCTGCATCATTACTCCATCCGTGTAAAGTTGCATTCCTTCGTAAAGGTGTTGAACTTCCTTCAGGGATATCCGCATTTGTCTGTAGACGAGTGTATGACATTCAGAGTGAGCGTTTATGGTGGCTAACTGATAAAGATTACATTAATGAACGACAAGAAGAAGTTGACCAGCTATTAGATAAGACAAAACTAGAAATGCATGGGGCAGTGCAGTCAGGAGGCCGTTCTCCAAAACCCTTGAATGGTCCAACATCAACAACACCTTCACTTAAATCTGGTTCTGATAGTGTTCAAAATAGTTCTTCCTTTGGTTCACAGGGTAAGGGAAAGAAGAGAGAGCGGGGTGATCAGGGATCTGATTCATCTAAAAGGGAACGATTAATCAAAACAGAAGATGGTGATACCAGTCAACATAGGCCAGAAAACATGTTAAAGTCTGAGATTGCTAAAATTACGGACAATGGTGGTCTTGTGGACTTTGAGGGAGTAGAAAGACTGGTACAGCTCATGCAACCTGACAGTGCTGATAAAAAAATAGATTTGGCTGGGCGAATAATGCTAGCTGATGTAATATCAGTCACAGATCAGTTTGATTGTCTTGGATGGTTTGTACAGCTCAGGGGTCTGCCTGTATTGGATGAATGGCTCCAGGAGGTCCATAAGGGGAAAATTAGTGATGGTAATACGCCTAAAGAAAGTGACAAGTCTGTTGAAGATTTGCTGTTAGCTCTACTTCGTGCATTGGATAAGCTGCCAGTGAACCTTCATGCTTTACAGACATGTAATGTTGGAAAGTCTGTGAATCATTTACGCACTCACAAGAATTCTGAAATTCAAAAGAAAGCTAGGAGCTTAGTTGACACTTGGAAGAAACGTGTTGAGGCTGAAATGAATATTAACGATTCAAAATCTGGATCTAGCCGGGGTGTTTCTTGGCCAGCAAAGCCTGCATCTTCTGAGGTGTCTCATGTTGGAAGTCGGAAAACAGGCGGATCTGCTGAGGTAGCTGCAAAGAGCTCTACCATGCTACAATCTGCACCCAAAAACTCTCTGGCTAAGATTAGCTCAGGAGAATCACTGTCCAAGCTCTCGCCATCTTCCACATCAACTAAAGCTACTATGACCTCAGTAGCCTGTAATTCAAAGGAGCAAAACATTAAACCTGGTGCTGGAACATCAGATTTACCCTTGACACCTATTAAGGAGGAAAGGAGCAGCAGTTCTAGTCAGTCTCAAAACAACAGCCTATCTTGTTCTAGTGAACAAGCAAAAACTATTGGTTCTTGTAGGGAAGATGCAAGGAGCTCCACTGCTGTGTCAATGAGTGTGAGCAAAATGCATGGCAGTGCATCTCGCCCCCGGAAATCAAGCAATGGTTTGCATGGGTCTGCTTTAACTGCAGTTCAGAAGGAGCCTCATTCTGGAAAAAACTCAAGTAGAAACTCAGCCTCTGAGAAGGTTTCACCGAATCAACCTGCCCATGAGAAGTCACCTGATGTGCCTCTTCCTGATCATGGAAGTAATCAGAGACTGATTGTTAGGTTGCCAAACACTGGCCGAAGTCCTACCAGGGGAGCTGGTGTGGGCTGTGAAGATCCTGCAATTCTGTCTGGCACAGCCTCACCTCCTGGAGACAAGCAGGAGAATGTGGATAGAAGAGTGAAATCCAAAACTGATGCTTCTCAGAACAATAATGTCTCGAATATGGCCACTGATGTTTGTGATGCTAGCGAAGCTGTGGCTAATTATGAGGAAGGTAGTGGCTCACCAACTGGTGAAGGATGCAGGACCAGTGAAGATGGTTATAAACTCACGGAAGCATCAAAACCAACTAGTTCATCAGGATTTCTTTCCAGATCAGGGCAGACTTATGATGCTTCCATGAGCTCCATAAATGCATTAATTGAAAGCTGTGTGAAAATTTCAGAGGCAAGTCCATCTGTGTCTCCTGTAGATGATGCTGGGATGAACCTACTTGCTACTGTAGCTGCTGGAGAAATATATAGGTCAGAAAATGTGACGCCAGCAGTTTCTCCTGGGAGGAAGTCTCCTGCAGCAGATGAATCATGCTCAGGCAATGATAGTAAGTTACAACATTCAGGTGAAGCAGTTGCTTGCCCTCTTGAACATTTGAAGGATGAAGCTACTGAAGATCATGTAAACACCACTGATCCTTCGCAGCTCAAGAATGATGCAAGACATACCGTAGGATCAAGATCATGTGACTTGTCTGGAGATGGTGAAACTACACAATCTAGTTGCAAAGAGAAAGAGAAAACTGGTGATGGTAAAAATCAAATGAATTCTTCCCCTACAGCTTCGCCACATAACGGGGAAGGTCCATTCTTAGGGCCTGATATCGAAGAGGAAGCTTCTGAAACATTATTGCCTTCTAGAAAAGATATTGTTGCAGAGCCTGAGGGAGCTAGTCCGCTTCATGAGAAGAGGAAATTGGAAACTCGTTGGGCTAAGAGCAGCAACAATTCAGACTCTAAAATGAAAACAAGGACTTCTATTGATAAAGACCGGAAGGTTGATCATGTTAATGAGAAGAAGATGGAGAACGAAGTTTCAGTTTGTGTAAGGCCTCATGTAAGTCTAAAAGTAGAGAAGGAAGTGTGCGAAAAATTACCTGAATCATCTACAGGTTTGGGTAATGAAAACCAGGTCAGTGGGGAGAAAGTGGCAGGTAGTGTCGTGTCAGTGCAAGAGCCCACTCTGGCAGAAAACCGTGAGTTTGTTGAGGGCAGAAATGAGAATGTTGTGGTACCACCTGCTCCAAGTAAGCATTTGATGGAATCTAAGGCTGTGAGTGCTGTTGACGTGAAACCATGTGAGGTGGATCATAGTAATGAAAGACAAAGGGATCTGGACTCATCAGGGCCTGCTGTCAACAACCAATGTACTGCAGAGAATTTGGATAGAAAGGAGGTTCTTGGTCTTGGCATTGATACATCAGCACAGTCTGAGTCTCCTAAAAACTCTGTACAAGATAATGAAGTGCTAAAAAAGCCTTCTGGGTTTAATTTGGACAGAGTTGTGTCTGATGGTGCCGCAGAACAGCATGCCTCTGGTCTTAGTGATTCACTTACTGCCAGAGTCTCGGATGTAGCAGTGAAGCTGGACTTTGATTTAAATGAGGGATTTCCTGTTGATGATGTGAATCAAGGGGATGTTGTGAGACAGGAAGAACCTCTCACATCATCTGCAGTCCACATTCCATGCCCTTTGCCTTTTCCTATTTCTTCCATGTCTGGGGCCTTCCATGCTTCAATTACTGTGGCTTCTGCTGCCAAAGGGCCTGTTATTCCACCAGAGAACCCGTTGCGGAGTAAGGGGGAACTTAGGTGGAAAGGGTCAGCTGCTACCAGTGCATTCCGTCCAGCTGAGCCCAGGAAAAACACAGAGCAGGCATTAAATACAAGCGATGGTAGTGGTACCAAGCATGATCGTGCTCCTCTAGATTTTGATTTGAATGTGCCTGATCAAAGGAGTTTTGAGGATGTGGCTTCCTATGGCTCGTCAGAGACTTGTTTAGAATCCTTGCCTCGTGACCGCGGGACTGCAGGACTTGATCTTGATTTAAACAGGGTTGACGAGACTCCTGATTCTGGTTGTTTTTCTGTGAGCAAACTGGATATTCCTTCTTTGCCAACTAAACCTTCATTATCTGGTGGATTATCCAGCGGTGGAAATATATCAAGAGACTTTGATTTAAATAATGGTCCAGGCCTTGATGAAGTTGGCACCGAAACCCCAGCACGTAGCCAGCAGATAAAAAGTACTGTACCAATGCCTTCGGCTGTTCATGGTGTAAGAACAAATAATGCTGATTTTGGGAATTATTCATCATGGTTTCCGTCAGGCACCTCCTATTCTGCGATCAATATGCCACCACTTCTACCTGGTAGAGAACAGAGCTTTGTTGCTGGTACTGGAGCACAGCGAATTTTGGGTGCTCCTGGTAGCACTTCTTTTGGTCCTGAAATCTATAGAGGGGCAGTTCTTTCATCCTCTCCGGCTGTTGCTTTTCCTCCCACTACACCATTTCAGTACCCAGGATTTCCTTTCGAAACCAATTTTCCTTTGTCTTCAAATTCCTTTTCTGGTTGTTCAACACCCTTCATAGACTCCTCAACAGCAGGTGGACTATACTTCCCTACTATGCCTTCACAGCTAGTTGGGCCTGGTGGTGTTGTCCCATCCAATTTTCCTCGTCCTTATATTATGAGCCTCCCAGGTGGTACAAGTAACGTGATGCCTGAAAGTAGAAAATGGGGAGGTCAAAGTCTGGATCTTAATTCAGGCCCTGGTGGTGCAGATGCAGAACGGAGAGATGATAGATTGCCTTCAGGGTTGAGGCAACCTCCTGTCTCAAGTTCCCAAGCCTTGATGGAGGAACAGATGAAGATGTTTCAGGTGGCAGGAGGTGTATTGAAGAGAAAGGAACCTGACGGTGCTTTTATTGATGACGTCAGAAATATTGAAGAGGATACCAGTGTGAAGACAGGCTGGAACAAGGCTGCAGAGAAGTTGGGCATTGAGTGTATGACCGCACTGCAAAAGTACGGAACTCCAATCCGTTCTTCCAGCATTTATTTGGATGGACAGGATTGGATTTATTGCTCTAGTCCTGACTGCCGAATTTTGTCACATCACATTCTGGGGATTGATAATGCACAGGTATAG 5061 0.4458 MTRNPPFFSLGFSSGQEGGIRLELMFLFKDEVAIDSVFKGHGGLCMCREDGREIRVGDCALFKPPQDSPPFIGIIRKLTLKKEESPSLEVNWLYRPADLKLAKGIQLEAAPNEVFYSFHKDETPAASLLHPCKVAFLRKGVELPSGISAFVCRRVYDIQSERLWWLTDKDYINERQEEVDQLLDKTKLEMHGAVQSGGRSPKPLNGPTSTTPSLKSGSDSVQNSSSFGSQGKGKKRERGDQGSDSSKRERLIKTEDGDTSQHRPENMLKSEIAKITDNGGLVDFEGVERLVQLMQPDSADKKIDLAGRIMLADVISVTDQFDCLGWFVQLRGLPVLDEWLQEVHKGKISDGNTPKESDKSVEDLLLALLRALDKLPVNLHALQTCNVGKSVNHLRTHKNSEIQKKARSLVDTWKKRVEAEMNINDSKSGSSRGVSWPAKPASSEVSHVGSRKTGGSAEVAAKSSTMLQSAPKNSLAKISSGESLSKLSPSSTSTKATMTSVACNSKEQNIKPGAGTSDLPLTPIKEERSSSSSQSQNNSLSCSSEQAKTIGSCREDARSSTAVSMSVSKMHGSASRPRKSSNGLHGSALTAVQKEPHSGKNSSRNSASEKVSPNQPAHEKSPDVPLPDHGSNQRLIVRLPNTGRSPTRGAGVGCEDPAILSGTASPPGDKQENVDRRVKSKTDASQNNNVSNMATDVCDASEAVANYEEGSGSPTGEGCRTSEDGYKLTEASKPTSSSGFLSRSGQTYDASMSSINALIESCVKISEASPSVSPVDDAGMNLLATVAAGEIYRSENVTPAVSPGRKSPAADESCSGNDSKLQHSGEAVACPLEHLKDEATEDHVNTTDPSQLKNDARHTVGSRSCDLSGDGETTQSSCKEKEKTGDGKNQMNSSPTASPHNGEGPFLGPDIEEEASETLLPSRKDIVAEPEGASPLHEKRKLETRWAKSSNNSDSKMKTRTSIDKDRKVDHVNEKKMENEVSVCVRPHVSLKVEKEVCEKLPESSTGLGNENQVSGEKVAGSVVSVQEPTLAENREFVEGRNENVVVPPAPSKHLMESKAVSAVDVKPCEVDHSNERQRDLDSSGPAVNNQCTAENLDRKEVLGLGIDTSAQSESPKNSVQDNEVLKKPSGFNLDRVVSDGAAEQHASGLSDSLTARVSDVAVKLDFDLNEGFPVDDVNQGDVVRQEEPLTSSAVHIPCPLPFPISSMSGAFHASITVASAAKGPVIPPENPLRSKGELRWKGSAATSAFRPAEPRKNTEQALNTSDGSGTKHDRAPLDFDLNVPDQRSFEDVASYGSSETCLESLPRDRGTAGLDLDLNRVDETPDSGCFSVSKLDIPSLPTKPSLSGGLSSGGNISRDFDLNNGPGLDEVGTETPARSQQIKSTVPMPSAVHGVRTNNADFGNYSSWFPSGTSYSAINMPPLLPGREQSFVAGTGAQRILGAPGSTSFGPEIYRGAVLSSSPAVAFPPTTPFQYPGFPFETNFPLSSNSFSGCSTPFIDSSTAGGLYFPTMPSQLVGPGGVVPSNFPRPYIMSLPGGTSNVMPESRKWGGQSLDLNSGPGGADAERRDDRLPSGLRQPPVSSSQALMEEQMKMFQVAGGVLKRKEPDGAFIDDVRNIEEDTSVKTGWNKAAEKLGIECMTALQKYGTPIRSSSIYLDGQDWIYCSSPDCRILSHHILGIDNAQV 1686
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele06g0247 1686 MobiDBLite consensus disorder prediction 1108 1128 - -
Lele06g0247 1686 MobiDBLite consensus disorder prediction 1544 1585 - -
Lele06g0247 1686 Pfam BAH domain 54 162 IPR001025 GO:0003682
Lele06g0247 1686 MobiDBLite consensus disorder prediction 201 230 - -
Lele06g0247 1686 ProSiteProfiles BAH domain profile. 52 167 IPR001025 GO:0003682
Lele06g0247 1686 SMART BAH_4 52 167 IPR001025 GO:0003682
Lele06g0247 1686 Pfam TFIIS helical bundle-like domain 368 417 IPR017923 -
Lele06g0247 1686 ProSiteProfiles TFIIS N-terminal domain profile. 334 420 IPR017923 -
Lele06g0247 1686 Gene3D - 46 278 IPR043151 -
Lele06g0247 1686 MobiDBLite consensus disorder prediction 231 266 - -
Lele06g0247 1686 MobiDBLite consensus disorder prediction 930 947 - -
Lele06g0247 1686 MobiDBLite consensus disorder prediction 841 964 - -
Lele06g0247 1686 SUPERFAMILY Conserved domain common to transcription factors TFIIS, elongin A, CRSP70 322 431 IPR035441 -
Lele06g0247 1686 MobiDBLite consensus disorder prediction 423 437 - -
Lele06g0247 1686 MobiDBLite consensus disorder prediction 457 512 - -
Lele06g0247 1686 MobiDBLite consensus disorder prediction 191 266 - -
Lele06g0247 1686 MobiDBLite consensus disorder prediction 1229 1279 - -
Lele06g0247 1686 SMART TFS2_5 340 419 IPR003617 GO:0005634
Lele06g0247 1686 PANTHER BAH AND TFIIS DOMAIN-CONTAINING PROTEIN-RELATED 47 1612 - -
Lele06g0247 1686 CDD TFIIS_I 376 418 - -
Lele06g0247 1686 MobiDBLite consensus disorder prediction 1108 1126 - -
Lele06g0247 1686 MobiDBLite consensus disorder prediction 422 695 - -
Lele06g0247 1686 MobiDBLite consensus disorder prediction 797 822 - -
Lele06g0247 1686 MobiDBLite consensus disorder prediction 523 615 - -
Lele06g0247 1686 Gene3D Conserved domain common to transcription factors TFIIS, elongin A, CRSP70 285 421 IPR035441 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele06g0247 Lele-ChrLele06 1487682 1494927 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR IWS1 Lele06g0247 BAH 8.2e-11 No_clan