Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele06g0238 ATGTGTGTGAGCAGCTTTCTCATGTTTCAACAACTTCAGCCTTTCCCTCTTGCTGTTCTGTGGAAAGCTTCTTGCTTTGTTCCCCACAGATATCACCCCCCATTCCGATTTAAGCCAACCAACCTGGTTTCCACGATTCTAGTATTGAAAACTGAAGCTAGGGGTAGCGTGGGGGACATTGGCATTCATGAAAACGACGAAGTTAAGGAGAGGATGGGTGTTCTGTGTCTTGGGATGGGGCCAGCTGCTTTTAGTGAGGGGGAAAAGGCAAATGAAACCAGTCTCTACAACAACGATAGCTTCACAAACCCATCAATGTCGAGCGGAACTGAAGCTTTCCCTGATTTAGGAAGACACTGCCAACACAAACATTGCAACCTCCTCGATTTTCTCCCTTTCTCCTGCGACGGTTGCCACCAGGTATTCTGTCTCGATCATCGATCTTATAAGTCTCACAATTGCCCCAAATCCGACCATAACAGCCGGAAGGTCGTCGTATGTGAAGCATGTTCTATTTCTATCGAAACCACCGGTCACATCGGGGAAGACGAGAAGGCGATCTTAGAGAGGCATGCGAATTCTGGAGATTGTGACCCTAAGAAGAAAAAGAAACCCACTTGTCCTGTTAAGAGGTGCAAGGAGGTCTTGACGTTCTCGAATTCAAGCATGTGTAAGACCTGCCACTTGAAAGTTTGCCTCAAGCACCGTTTTCCGGCCGATCATGCTTGTAACAGGGTCGCTTCATCTTCCTCTTCGGTGGTTAAAACTGTTAATGGACGGTGGAATGATCGGTTCCTAACTGCTCTGTCGTTGAGGAATGGAAAGGACTGCGCAAAGAGCCCTACTACTTCTCCTAGTCCTTCAGCAACTCCATCTGTCAAAGCCTGCTGA 891 0.477 MCVSSFLMFQQLQPFPLAVLWKASCFVPHRYHPPFRFKPTNLVSTILVLKTEARGSVGDIGIHENDEVKERMGVLCLGMGPAAFSEGEKANETSLYNNDSFTNPSMSSGTEAFPDLGRHCQHKHCNLLDFLPFSCDGCHQVFCLDHRSYKSHNCPKSDHNSRKVVVCEACSISIETTGHIGEDEKAILERHANSGDCDPKKKKKPTCPVKRCKEVLTFSNSSMCKTCHLKVCLKHRFPADHACNRVASSSSSVVKTVNGRWNDRFLTALSLRNGKDCAKSPTTSPSPSATPSVKAC 296
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele06g0238 296 MobiDBLite consensus disorder prediction 276 296 - -
Lele06g0238 296 SMART AN1_Zf_4 207 248 IPR000058 GO:0008270
Lele06g0238 296 SMART AN1_Zf_4 120 159 IPR000058 GO:0008270
Lele06g0238 296 SUPERFAMILY AN1-like Zinc finger 111 164 IPR035896 -
Lele06g0238 296 Gene3D - 105 169 IPR035896 -
Lele06g0238 296 PANTHER ARSENITE INDUCUBLE RNA ASSOCIATED PROTEIN AIP-1-RELATED 112 280 - -
Lele06g0238 296 ProSiteProfiles Zinc finger AN1-type profile. 201 251 IPR000058 GO:0008270
Lele06g0238 296 SUPERFAMILY AN1-like Zinc finger 199 249 IPR035896 -
Lele06g0238 296 Gene3D - 183 259 IPR035896 -
Lele06g0238 296 Pfam AN1-like Zinc finger 120 157 IPR000058 GO:0008270
Lele06g0238 296 Pfam AN1-like Zinc finger 207 245 IPR000058 GO:0008270
Lele06g0238 296 MobiDBLite consensus disorder prediction 275 296 - -
Lele06g0238 296 ProSiteProfiles Zinc finger AN1-type profile. 114 162 IPR000058 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele06g0238 Lele-ChrLele06 1434894 1438482 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele06g0238 107 277 C2H2 Transcription Factor Family AT3G28210 64.912 2.29e-78 234