Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele06g0231 ATGCTGTTCAACCGCACTGAACATTTAATTTTGCAGGAAATTCCAGATTCAGATCAAAGTATTTCTGGTAATTCCTTTGAAGAATGTTCTCCTTCTATAGAGCAAAGCTTGTGGCTAATAACCTGTTTCTTCGTCAATTTGGCAGAGGATGAAGAGTCAGACGACTTTTGCCTGGAGACTGCCGTTTCTTTGGATCCTTCTGCCAAGAACCAGGAAGAATTGCCTCTTCCAGTGCTGCTGGATTTTCTGAGAGGTGCCAGTAAACGAAGCTTGGATGGGAATGGGAGCAGTTCATCATTTGAGGTATGCCTACTCAGAGTTCGTATTACTTTTCTAACTGATTGTTACACTCAACTAACATTCTATGATCAGAAACCAACTGTTGTGCATGAAGATGAGGTCGAATTGCCTGACTTTGATGAGGTTGAAGTCAATCGCCTTTCAGGAGAGATAGCTGCCAACTCAAGTGATGAAGAAGCAATTTCTGAAGATGGGGTAGTAGTTTTATCACTCAAAGAAAATGGCACATTTGGCGCTCATGGAATACAAGGAATCTGGAGCAAAGCTAAGCCAAAATCGTTGTCACATAAGCATGAATCGTCTGTATTTGCCACATTACCTCAAACAAGAGGAAAGAAAGTAAAACATTTCCCACCTAGGATTAGATCCCTCTTGCAAGACAGAAGTAATGGTGAAGATTCCCCTGAGCCTATGGATAGTGCATCATCAAGTGATAATGAGATAAGTGATCAAAATATGAAGATTGCTTTCCCAGAAAAGAAATTGCAGACCATGGCTGATCGATTTCACCAAGCTTTAGGGGCTTCCTGTGTGACTGATGAAGGGACTTATGTTGCAGCACTCAAATCATTTGGTTATCTAACTAATAGTACCTTGCTTCGGGTCATGCAGAAAGAAAAAGGAAGGGATGTTAACTTTTTGAAAAAGTCACAAGCTGGAGCTAGCCCGCACAGTAAAACTTTTGCTATTATTTTGCATATGCAACATGCTTACAAGCGTGGCTTGTGGCTCTCTCATATCACTCAAGGTGGTCTTGGCGGTGTTGATGTAAAAATCATTTCAAGGTCCGTGATGGTCTTCTGCAATATGGAAAGGACCGTCTTTAATCCAATTGTTAGTGATGTTGACCTCGAAGGTGGGAACATGATCCGTATTCACCCGCCATGGAAGAGGTGCATTGGTGAGCTTTCGTTTCGATCAGCTGTTCGTGGTGTCCGGCTTCGACGAGACCGAATAATTGTAGTTGTGGAGCAGAAGATTTTTGTGTACAATTTCGCTGACTTTAAGTTACTTCATCAAATTGAGACCATTGCAAACCCGAAGGGGCTCTGTGCAGTTTCGCAATTGGCCGAGTCTATGGTATTGGCGTGTCTCGGTTTGCATAAGGGTCAGATACGTGTTGAGCATTATGCACAGAAAAAAACCAAATTCATTTCGGCTCATGATTCAATAATAGCTTGTTTCGCTCTTACACTTGATGGTCAGTTACTCACCACCGCCAGCACCAAGGGTACTTTAATTCGAATTTTTTATACCGCCGAAGGCACGCAGCTTCAGGAAGTAAGAAGGGGTGCAAATGTGGCAGAGGTCTATAGTTTGGCATTCTCTTCTACTGCTCAGTGGCTAGCAGTCTCGGGTGATAAGGGTACTGTCCATGTCTTCAGCCTTAAGGCTAACTCTAGTTCTCCTCAGCATGAAAAATCACAGATTACAAGAGATTCTCATGCTGCCAGTACACCGTCTAGCTCACCCCTTGCATTGGTTAAATTTAGAGGTAAAATATCTCATCAATTTAATTTTGTTTGCCGTGATTGTGTATTAACATTCACTTTATTAATAACCAAGGTGCATTATTCGATGTTGTTAATTATGACTATACCCTATACTTTTGTTTTCTGTGACTGTCGTGGAGTTGGAATGTTGAGGGACTGA 1953 0.4199 MLFNRTEHLILQEIPDSDQSISGNSFEECSPSIEQSLWLITCFFVNLAEDEESDDFCLETAVSLDPSAKNQEELPLPVLLDFLRGASKRSLDGNGSSSSFEVCLLRVRITFLTDCYTQLTFYDQKPTVVHEDEVELPDFDEVEVNRLSGEIAANSSDEEAISEDGVVVLSLKENGTFGAHGIQGIWSKAKPKSLSHKHESSVFATLPQTRGKKVKHFPPRIRSLLQDRSNGEDSPEPMDSASSSDNEISDQNMKIAFPEKKLQTMADRFHQALGASCVTDEGTYVAALKSFGYLTNSTLLRVMQKEKGRDVNFLKKSQAGASPHSKTFAIILHMQHAYKRGLWLSHITQGGLGGVDVKIISRSVMVFCNMERTVFNPIVSDVDLEGGNMIRIHPPWKRCIGELSFRSAVRGVRLRRDRIIVVVEQKIFVYNFADFKLLHQIETIANPKGLCAVSQLAESMVLACLGLHKGQIRVEHYAQKKTKFISAHDSIIACFALTLDGQLLTTASTKGTLIRIFYTAEGTQLQEVRRGANVAEVYSLAFSSTAQWLAVSGDKGTVHVFSLKANSSSPQHEKSQITRDSHAASTPSSSPLALVKFRGKISHQFNFVCRDCVLTFTLLITKVHYSMLLIMTIPYTFVFCDCRGVGMLRD 650
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele06g0231 650 MobiDBLite consensus disorder prediction 235 250 - -
Lele06g0231 650 MobiDBLite consensus disorder prediction 567 588 - -
Lele06g0231 650 SUPERFAMILY WD40 repeat-like 404 565 IPR036322 GO:0005515
Lele06g0231 650 MobiDBLite consensus disorder prediction 211 250 - -
Lele06g0231 650 Gene3D - 401 584 IPR015943 GO:0005515
Lele06g0231 650 SMART WD40_4 521 562 IPR001680 GO:0005515
Lele06g0231 650 SMART WD40_4 478 518 IPR001680 GO:0005515
Lele06g0231 650 PANTHER WD-REPEAT PROTEIN INTERACTING WITH PHOSPHOINOSIDES WIPI -RELATED 382 590 - -
Lele06g0231 650 MobiDBLite consensus disorder prediction 220 234 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele06g0231 Lele-ChrLele06 1400092 1406809 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele06g0231 223 328 EF-hand Containing Proteins AT1G02960 33.645 1.73e-08 55.1
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele06g0231 06 1400092 1406809 Lele06g0231 06 1400092 1406809 ECH
Lele05g0413 05 2353622 2364403 Lele06g0231 06 1400092 1406809 ECH
Lele06g0231 06 1400092 1406809 Lele07g0432 07 2441826 2448093 hybridization
Lele06g0231 06 1400092 1406809 Lele08g0236 08 1420013 1424164 hybridization