Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele06g0221 ATGGTTGAAACCAGGCGCAGCTCCTCTTCTGCCAAGCGCTCTCTCTCTTCACCCCCTCCTTCTAACGCCAAACGATCTAAGGCGTCAGAGGATGCGTCGTCAACCAGTCTCCCCTCGGCTGAAATTTTCGGTCAGGTCAACGAATCTGGAAATGAATCTCGAGAACCGGAGCTACGGCCATCTGATCTGCCAGATGCCGATTCGTTGAAGGCTGTAGACCTGAGTGACGCGAGATTACCTGAGAAATCCCCTGCCGTGGCAGTCGAAGGCGAGGCCCTGGTGTCGCCGAGGTCTTCAGATGAAACTGCGGTGGAAGCGGAGAAATCAAAGTCTGCTGGTGTGGCGGCGCATGGGCGGTCGAAGAAACGCCCAACGAAATCCACAAAATCGAGCGCCAAGGCTGCATGGGGAAAGCTTCTCTCTGAGTGCTCTCAGAATCCTCATCTGTCCATGTGCGGGCTCTTCACTGTTGGTCAAGGACGTCAGTGTGATTTATGTCTTAAAGATTCTCCTGTTAGTAATGTTTTGTGCAAATTGAGGCACATTGAGCGTGGAGGTTCATCCGTTGCATTACTGGAAGTGATAGGAGGTAAAGGCGTTGTCCAAGTCAATGGCAGGAACTACAATAAAAATTCCCGTGTGATCTTAAGTGGTGGTGATGAGGTGGTCTTCAGTTCTTGTGGCAAACATGCTTATATTTTTCAACAGCTCACCTACAATAATATAACCACAACAGGGGTACCCCCTTCTGTAAATATATTAGAAGCTCGAAGTGCACAAATTAAGGGAATGCGAGTTGAAGGATCTGGGGACTCTTCAGCTGTTGCAGGAGCATCAATATTAGCATCTTTATCCAACCTTCATAAAGATTTATCTCTCCTTCCACCTCCTGCTAAAACCGGCGAGAATGCCACCCAGAATGCTGAGGTTTTGTCTTTAACTTCTGGCCTTAGGGATGATAGCATGGACAATGAAATGAAGGATGCTACCAAAAATGATGATTCCGCTGAAAATATTTTATCCGAGAAAACTGTTCTTGCATCCTCTGCTGCTGCCAATGAAAATCATAGTCTTGACAGCAAGGGAGTAGATGCTGGTGTGGGTGCAGATGCTGGGAAGGTAAATGGGGCTGCCTATGAATTAAGGCCATTGTTGCACGTGCTTGCTGGTTCTAGTGCTGAATTTGATTTGGGCAGTAGCATTTCCAAAATATTGGAAGAGCGGAGGGATTTAAGAGATCTCCTTAAGGATTTTGGCCCCCAAACAATCTTGGCATCAACGAGGCGGCAAGCATTTAAGGAGAGCTTACAACAAGGAATTCTAAATCCTGATGATATTGATGTCTCATTTGAAAGTTTCCCATACTTTCTAAGCGATACAACAAAGAATGTTATGATTGCTTCTACATACATTCATTTGAAGTGCAATGGTTTTGCAAAGTATGCTTCAGATCTCCCTTCAGTGTGCCCAAGAATATTGTTATCTGGTCCTGCAGGTTCGGAGATATATCAGGAAACTTTGTCAAAGGCCCTTGCAAAGCATTTTGGTGCCAGGCTACTGATTGTGGATGCTCTTTCATTGCCTGGTCTAAATTTACAGGGGATGCCACCGAAGGAGTCTGATTCTGCTAAAGAAAGTTCTAGGCTTGAGAAAGCATCTTGGTTTAGTAAGCGAAGTGCACAGGCTACCACATTACCGCATAAGAAGCCAACTTCTAGTGTTGATGCTGAGATTGTAGGAGGGTCAACATTAAGCTCTCAAGCCATGCTGAAGCAAGAGGTATCTACTGCATCATCCAAGGGCTCTACCATAAAAACAGGTGACAGAGTTAAATTCGTTGGTAATGTTCCTTCAACCAATATATCGCTAACAAATTATCCTTCTAGGGGACCAAGCTATGGCTCCCGTGGAAAAGTTCTTCTTGCATTTGAAGAAAATGGGTCATCGAAAATTGGAGTCAGGTTTGATAAGTCAATTCCAGATGGCAATGATCTTGGAGGCCTTTGTGAAGAGGATCGCGGTTTCTTTTGTTCTGCTAATCATTTACTACGAGTTGATGGTTCTGCAATGGATGACAATGACAAGCTTGCAATAAATGAGATTTTTGAGGTTGCCTCCAATCAAAGCAGAAGTGGTTCGCTAGTCTTGTTCCTGAAAGATATAGAGAAAGCACTGGTTGGAAACACTGAAGTTTTGAAGAGTAAATTGGAAAGTTTGCATCAGAATGTTGTTGTAATTGGCTCGCATACCCAGCCAGACAATCGCAAGGAAAAGACCCACCCAGGTGGCCTTCTGTTTACAAAGTTTGGGAGCAATCAGACTGCACTACTTGACCTTGCATTTCCGGATAATTTCAGTAGACTTCATGATAGGAGCAAAGAAACCCCCAAAACAATGAAGCAACTTAGTCGCCTTTTCCCCAACAAAGTGACAGTACAGCTGCCTCAGGATGAGGCTTTGCTTTCTGATTGGAAACAGCAGTTGGAACGTGATGTTGAAACTATGAAAGCTCAGTCAAATGTTGTCAGCATTCGGACAGTTCTCAACAGGTTTGGATTGGATTGCCCTGACCTTGAGACTCTTCGTATTAAAGATCAAGCCCTAACAACTGAAAGTGTGGAAAAAGTCATTGGCTGGGCTATAAGTCATCATTTTATGCATCAATCTGAGGATTCAATCAAAGACTCTAAGCTTGTGATATCTACTGAGAGCGTTAAGTATGGCTTGAACATTCTGAAGGGCATTCTGAGTGAAAACAAGAACTTAAAGAAATCGCTTAAGGACGTGGTTACTGAGAATGAATTTGAGAAAAAACTTCTTGCTGATGTTATTCCACCCAGTGATATTGGGGTCACTTTTGATGATATTGGAGCCTTAGAAAATGTAAAGGACACTTTGAAGGAATTGGTCATGCTTCCTCTTCGGAGGCCTGAATTGTTCTGCAAGGGACAGTTGACTAAGCCTTGCAAGGGGATATTGCTCTTTGGCCCCCCTGGTACTGGGAAAACAATGCTTGCAAAAGCTGTAGCAACTGAGGCTGGAGCAAATTTCATCAACATCTCGATGTCGAGTATCACTTCAAAGTGGTTTGGTGAAGGAGAGAAGTATGTCAAAGCGGTCTTTTCTCTAGCAAGCAAAATTGCTCCAAGTGTTATTTTTGTTGATGAGGTTGATAGCATGTTAGGAAGACGTGAGAATCCGGGTGAGCATGAGGCTATGCGTAAGATGAAGAATGAGTTTATGGTGAACTGGGATGGCTTGCGTACGAAAGATAAAGAGCGTATACTTGTTCTTGCAGCGACAAATAGGCCTTTTGACCTTGATGAGGCTGTTATTAGGAGGCTTCCCCGAAGATTGATGGTTAATTTGCCAGATGCTCTAAACAGAGAGAAAATTCTGAGAGTCATTCTAGCAAAAGAAGATTTGGCACCTGATGTTGAGTTGGAAGCAATCGCAAATATGACTGATGGATATTCAGGAAGTGACTTAAAGAATCTGTGTGTTACAGCAGCTCACTGTCCAATTAGGGAAATCTTGGAGAAGGAAAAGAAGGATAGAAGTTTGGCAGTGTCTGAGCACAAACCTTTACCTGCATTATGTAGCAGTGCCGACATTCGGCCTTTGAGGATGGAAGATTTCAAGTATGCACATGAGCAGGTGTGTGCAAGTGTGTCATCGGAGTCGACAAATATGAATGAGCTACTCCAATGGAATGACCTTTATGGAGAAGGCGGGTCCAGAAAGATGAGATCTCTGAGCTATTTCATGTAA 3771 0.4397 MVETRRSSSSAKRSLSSPPPSNAKRSKASEDASSTSLPSAEIFGQVNESGNESREPELRPSDLPDADSLKAVDLSDARLPEKSPAVAVEGEALVSPRSSDETAVEAEKSKSAGVAAHGRSKKRPTKSTKSSAKAAWGKLLSECSQNPHLSMCGLFTVGQGRQCDLCLKDSPVSNVLCKLRHIERGGSSVALLEVIGGKGVVQVNGRNYNKNSRVILSGGDEVVFSSCGKHAYIFQQLTYNNITTTGVPPSVNILEARSAQIKGMRVEGSGDSSAVAGASILASLSNLHKDLSLLPPPAKTGENATQNAEVLSLTSGLRDDSMDNEMKDATKNDDSAENILSEKTVLASSAAANENHSLDSKGVDAGVGADAGKVNGAAYELRPLLHVLAGSSAEFDLGSSISKILEERRDLRDLLKDFGPQTILASTRRQAFKESLQQGILNPDDIDVSFESFPYFLSDTTKNVMIASTYIHLKCNGFAKYASDLPSVCPRILLSGPAGSEIYQETLSKALAKHFGARLLIVDALSLPGLNLQGMPPKESDSAKESSRLEKASWFSKRSAQATTLPHKKPTSSVDAEIVGGSTLSSQAMLKQEVSTASSKGSTIKTGDRVKFVGNVPSTNISLTNYPSRGPSYGSRGKVLLAFEENGSSKIGVRFDKSIPDGNDLGGLCEEDRGFFCSANHLLRVDGSAMDDNDKLAINEIFEVASNQSRSGSLVLFLKDIEKALVGNTEVLKSKLESLHQNVVVIGSHTQPDNRKEKTHPGGLLFTKFGSNQTALLDLAFPDNFSRLHDRSKETPKTMKQLSRLFPNKVTVQLPQDEALLSDWKQQLERDVETMKAQSNVVSIRTVLNRFGLDCPDLETLRIKDQALTTESVEKVIGWAISHHFMHQSEDSIKDSKLVISTESVKYGLNILKGILSENKNLKKSLKDVVTENEFEKKLLADVIPPSDIGVTFDDIGALENVKDTLKELVMLPLRRPELFCKGQLTKPCKGILLFGPPGTGKTMLAKAVATEAGANFINISMSSITSKWFGEGEKYVKAVFSLASKIAPSVIFVDEVDSMLGRRENPGEHEAMRKMKNEFMVNWDGLRTKDKERILVLAATNRPFDLDEAVIRRLPRRLMVNLPDALNREKILRVILAKEDLAPDVELEAIANMTDGYSGSDLKNLCVTAAHCPIREILEKEKKDRSLAVSEHKPLPALCSSADIRPLRMEDFKYAHEQVCASVSSESTNMNELLQWNDLYGEGGSRKMRSLSYFM 1256
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele06g0221 1256 Gene3D - 119 241 - -
Lele06g0221 1256 MobiDBLite consensus disorder prediction 1 131 - -
Lele06g0221 1256 FunFam p-loop nucleoside triphosphate hydrolase superfamily protein 950 1126 - -
Lele06g0221 1256 SMART AAA_5 988 1125 IPR003593 -
Lele06g0221 1256 Pfam ATPase family associated with various cellular activities (AAA) 992 1121 IPR003959 GO:0005524|GO:0016887
Lele06g0221 1256 CDD AAA 990 1123 - -
Lele06g0221 1256 SUPERFAMILY SMAD/FHA domain 153 228 IPR008984 GO:0005515
Lele06g0221 1256 PANTHER AAA ATPASE, PUTATIVE (AFU_ORTHOLOGUE AFUA_2G12920)-RELATED-RELATED 430 1255 - -
Lele06g0221 1256 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 951 1229 IPR027417 -
Lele06g0221 1256 MobiDBLite consensus disorder prediction 1 51 - -
Lele06g0221 1256 Pfam AAA+ lid domain 1145 1181 IPR041569 -
Lele06g0221 1256 Gene3D - 950 1230 IPR027417 -
Lele06g0221 1256 Gene3D - 1124 1218 - -
Lele06g0221 1256 MobiDBLite consensus disorder prediction 52 77 - -
Lele06g0221 1256 ProSitePatterns AAA-protein family signature. 1095 1114 IPR003960 GO:0005524|GO:0016887
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele06g0221 Lele-ChrLele06 1344424 1354150 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele06g0221 951 1195 Calmodulin-binding Proteins AT3G56690 39.286 2.49e-41 163