Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele06g0195 ATGGTATCTGAAGGAACATGGTTGGTCATGAATTCATCTGCGATAGCTATGAATGCGAATAGGGGAAGAAGAAGGAAAGTGGATTTGAAGAAGACACTCGAAGCCATTATCATGGTGTTAAGCGGAAAAATGTTGCTTGGAGGGAGTCAGGATTCAGGAACACTCGAAGGAAATACAAGCAAAACTTTGATGTACTTCATGTGGGAGCCTGAAATGATTGAACTTGTCGTCCATCGAAACCTCAAGCCCCGGTTCTCCCTGTTCCTCACTTTCTCCCTCTTCCCAAATCTCACCATGTTTAACTTCACCGGAAGAACAGCTCTTTCCCTCGCTCTTGTGCTATTTCTCTCTTTAGTATCTCTGCTTCACTTTTTTCCACCCCATCATGTCAGCCTCTCGAAAACACGCCTCCATTTACAAAATCACCTGCAAGCAGCCCACACCACATGCCAAGGAACACTCTACCCACAACTCTGCGTCTCAACGCTTGCTTCCTTTTCCGATCTTACCTCCAAATCTGTCCCGCAAATCATCTCCTCTGTCATCAATCTCACGGTGTCCGAGGTGAAATCCTCGTCCCACAACTGCAATGGCCTCCGAAGCAACCTCAGGAATCTCGATCCTCTCGAACAGAGAGCCCTCGACGACTGTCTCAAATTGTTTGATGACACTGTCTACGAGCTCGACGCCACCATGGCCGATCTCTCCGGCGCCAGAATAGGCTTAAAGCGTTACCGTGACTTGCAGACACTGCTCAGCGGCGCAATGACTAACCTGTACACGTGTATTGACGGGTTTGCTTATAGCAGAGGGAATGTGAGAGACAGGATACAGGACAGGTTGTTTGAGATCTCTCGCCATGTTAGTAACTCATTGGCCATGCTCAAGAACGTGCCAGGACTGAAGAAAGCTTCCGAGTCTGAGATCTTCCCGGAGTACGGAAACGTGAAGAATGGGTTCCCTTCGTGGTTGTACTCCAGAGAACGAAAGCTCCTGGAATCTAACGTGAACGAGACGAGGTTCGATATTGTGGTGGCAAAAGACGGCACGGGCAATTTCACTACTATTGGGGAGGCTGTGAATGCAGCTCCGAACTCCAGCACGAGCAGGATTGTGATACACATAAAAGCCGGGGCATACTTTGAGAATGTGGAGGTGATCAGGAAAAAGACGAATTTGATGTTCGTTGGGGATGGAATTGGGAAGACGGTTGTGAAAGCCAGTAGGAATGTCATCGACGGATGGACAACTTTTCAATCAGCCACCGTAGCTGTGGCGGGAACGGGATTCATAGCGAAGGGCGTGACGTTCGAGAACTCAGCCGGAGCGAGCAAGCACCAAGCCGTGGCTCTGCGAAACAGTGCCGACCTATCAGCATTCTACAAATGCAGCTTTGTCGGGTTTCAAGACACACTCTACGTCCATTCCCTCAGACAGTTCTACCGAGACTGCGACGTTTACGGCACCGTGGACTTCATCTTCGGCAACGCCGCCGCTCTCTTCCAAAACTGCAACTTATACGCGCGCAAGCCTCTCCAGAACCAGAAGAACATGTTCACCGCTCAAGGCCGAGACGACCCGAACCAGAGCACCGGCATTTCCCTCTTGAACTGCAAAGTCGCCGCCGCAGAGGATTTAATCCCCGTCAAGTCCTCATTCAAGACCTACTTGGGACGCCCCTGGAAGCCCTATTCCAGGACGGTGTATCTGAAATCTCACATGGAGGATCTGATTCAGCCTGCCGGCTGGTTGGAATGGAACGGAACGTTGGGCTTGGACACGTTGTATTATAGGGAGTACATGAATGGAGGTCCCGGTTCTAATGCGAGCGCCAGAGTTACGTGGCCTGGTTTTAGGGTCATCAACTCCTCCGCCGAGGCTTCTCAGTTCACCGCCGCACGCTTTATTCATGGATATGACTGGTTGAATTCCACCGCCATTCCCTTTTATCTTGACTTGAGCTGA 1965 0.5043 MVSEGTWLVMNSSAIAMNANRGRRRKVDLKKTLEAIIMVLSGKMLLGGSQDSGTLEGNTSKTLMYFMWEPEMIELVVHRNLKPRFSLFLTFSLFPNLTMFNFTGRTALSLALVLFLSLVSLLHFFPPHHVSLSKTRLHLQNHLQAAHTTCQGTLYPQLCVSTLASFSDLTSKSVPQIISSVINLTVSEVKSSSHNCNGLRSNLRNLDPLEQRALDDCLKLFDDTVYELDATMADLSGARIGLKRYRDLQTLLSGAMTNLYTCIDGFAYSRGNVRDRIQDRLFEISRHVSNSLAMLKNVPGLKKASESEIFPEYGNVKNGFPSWLYSRERKLLESNVNETRFDIVVAKDGTGNFTTIGEAVNAAPNSSTSRIVIHIKAGAYFENVEVIRKKTNLMFVGDGIGKTVVKASRNVIDGWTTFQSATVAVAGTGFIAKGVTFENSAGASKHQAVALRNSADLSAFYKCSFVGFQDTLYVHSLRQFYRDCDVYGTVDFIFGNAAALFQNCNLYARKPLQNQKNMFTAQGRDDPNQSTGISLLNCKVAAAEDLIPVKSSFKTYLGRPWKPYSRTVYLKSHMEDLIQPAGWLEWNGTLGLDTLYYREYMNGGPGSNASARVTWPGFRVINSSAEASQFTAARFIHGYDWLNSTAIPFYLDLS 654
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele06g0195 654 CDD PMEI-like_3 148 300 - -
Lele06g0195 654 Pfam Pectinesterase 342 638 IPR000070 GO:0030599|GO:0042545
Lele06g0195 654 Pfam Plant invertase/pectin methylesterase inhibitor 147 294 IPR006501 GO:0004857
Lele06g0195 654 SUPERFAMILY Pectin lyase-like 341 651 IPR011050 -
Lele06g0195 654 Gene3D - 336 653 IPR012334 -
Lele06g0195 654 TIGRFAM PME_inhib: pectinesterase inhibitor domain 115 297 IPR006501 GO:0004857
Lele06g0195 654 PANTHER PECTINESTERASE 118 643 - -
Lele06g0195 654 FunFam Pectinesterase 336 653 - -
Lele06g0195 654 ProSitePatterns Pectinesterase signature 2. 486 495 IPR033131 -
Lele06g0195 654 Gene3D Invertase/pectin methylesterase inhibitor family protein 144 298 IPR035513 -
Lele06g0195 654 SMART PMEI_2 141 294 IPR006501 GO:0004857
Lele06g0195 654 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 147 298 IPR035513 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele06g0195 Lele-ChrLele06 1205966 1211330 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele06g0195 170 653 Carbohydrate Esterase AT4G02320 53.106 0.0 540