Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele06g0186 ATGGCGGCAGAGAGGACATTGTCGTTTTCCGTGGCATCGGTAGTGGAAGATGTGCTTCAACAGCACGGGACTCAGCTAAAAGATCTTGATTTGGAATCCAGAAAAGCAGAAGAAACTGCATCAAGAAGATATGAAGCAGCAGGTTGGTTGAGAAAGATGGTTGGAGTTGTTGCAGCTAAAGATTTACCAGCCGAGCCCTCTGAGGAAGAGTTTAGGCTTGGTTTGAGAAGTGGGATTGTCCTCTGCAACGTTATTAATAAGGTTCAACCTGGAGCTGTACCCAAGGTCGTGGAAAGTCCTATTGATTCTGCACTTATCCCAGATGGTGCACCATTATCGGCATATCAGTATTTTGAAAACGTGAAAAACTTTCTTGACGCTGTCCAGGAAATCGGACTTCCTACCTTTGAGGCATCTGATCTGGAACAAGGAGGAAAATCATCGAGGATTGTAAATAGCGTTTTGGCGCTTAAATCCTATAGTGAATGGAAACAAAACGGGGCGAATGGTGCGTGGAAATTTGGTGGAGCTCTGAAACCCACAACTTCAGGAAAATCTTTTGTCAGAAAAAATTCAGAGCCATTTACTAATTCCCTGTCCAGGACTTCATCCATTAATGAAAAATCTCTGCCTGCTTTAACCTCTGACGTTGAGTCTAATAAAATGTCGGTTTCTCATTCTTTGAGCATGCTGGTCAGTGCAATGCTATTGGACAAGAAGCCTGAAGAAGTTCCAATGACAAAAACAACTTCAAGAAACGCTGTTTCTCAAGGCAATGCTTCTGTATCAAAGCTTGTTTTGGTAGATAAGAAGGCGGAAAATAAAACTATTGTAGTTACAAAGAAAGAGGCAGTCATTCATAAAGACCGTGAACTAAAGCATACTATTTATACTACAAAAGCTGGCATGCAGTTCATGCAAATGAAATTTCACGAGGAATTCTCCAATCTTGGTAGGGATTTAGAATCACAAAATTTAAGATCATCGCTTTCTTGCATGCACATTGATGGCTTAGCTCATGCGGCTTCTGGATATCGCAGAGTTCTTGAAGAAAATCGCAAACTTTACAATCAAGTACAGGATCTTAAGGTGGAAAATATAGAAGATGGAACTATCACAATTAATGTCTCATCAAAGAATGGGAAAGGACGCAGATCCTTTAACTTCAACAAAGTCTTTGGACCATCTGCAACCCAAGCGGAGGTATTCTTTGATATGCAGCCTCTCGTCAGGTCTGTTCTTGATGGGTATAACGTTTGCATCTTTGCATATGGTCAAACAGGATCAGGAAAAACTTACACTATGACTGGACCGAAAGAGATTACAGAGAAAAGCCAAGGTGTAAACTATCGGGCTCTGGGTGACTTGTTTCATATGGCAGATCAGAGAAAAGACACTTTTCGTTATGATGTGTCTGTTCAAATGATTGAGATTTACAATGAGCAATTGCCCTTAACCGTCAATACATTAGAAATTCGAAATAGTTCTCATAAGGGGCTCAGTGTGCCCGATGCAAGCCTCGTTCCTGTATCTTCAACTCTTGATGTTATTGATTTGATGAACCTGGGGCAAAGGAACCGTGCTGTTGGAGCAACTGCCCTTAATGATAGAAGTAGCCGCTCTCATAGGCATGTTCATAATCCATTCATTTCCGGAGGACAGGCCAAGACCCTAATGTTCGTCCACGTAAGTCCAGAGAGTGACGCTGTTGGAGAAACAATCAGCACCTTAAAATTTGCTGAAAGAGTTGCTACAGTTGAGCTTGGAGCTGCTCGAGTGAACAAAGATAGTGCAGATGTTAAAGAGCTCAAGGAACAGTTGAACAAGAAATCTATTGGACAGATTGCTAGCCTTAAGGCAGCGTTGGCAAGAAGGGGGGGAGAATCAGAACAGGTGCAGCATTCTTTATCTGGAAGCTCTGAAAAATACAGGCAAAAGGCTGGTAGTGAGCTCTCACCTTATCATACCGACAAGCGGGGTGCAGATACACTGGGTGATCCCCTCGGATGCCGGCAACCTATGGTTGATGTTGGCAACATAGAGCTTCACAGTAATAGCACATTGAAGCCAAAAACTCAGAGCTTTGATCTTGATGAGATATCAACAAATTCACCGCCGTGGCCCCCAGTGAGTAGTCCTGGACCAAACTACGGGGAAGATGATAAAGAAACTGGGTCGGGAGAGTGGGTTGATAAGGTCATGGTAAATAAGCAAGATGCGAGCAAAACTGAGAACCTCTTGGGACACTGGGGAGCAGACAATAGACACTTATCTGATGTCTTTTATCAGAAATACCTCCAAGATTCTCCCAAAATGTACGCTGATCCATCCTATAATATGTTCATGGGAGGCAATCATTTCAATGCTGCAGGTTCGGATGGCATGGATGATCTTGATGCTGCGACCAGTGATTCCTCGGAACACGACTTACTCTGGCAGTTTAATCATTCCAAACTTCCTGGCGTCGCCAACATTGGACCAAAGTTAAAAAAAGGCCCAGAACTGAGGAGGAAGAAATGTCATCCGAATAGGTGGACCAGAGACCCAAAGCTTGCTATAGAAGCTAAAACACGGTTTCAGCAAATTCAAGAGGCTTATTCGGGGACGTATCATTATTGTATTCGCACGTCAGAATTCTGGAAACAGGGATTTGTTGATTTCATGCAAGAAATGGTCTCCATGACGCAGAGAGAGAGCCCCCAGGAATACACGTTGGAGGATCTTGAGAGACAGCTAATGGACATGATGGAAGACCACGGTGAAGGAACGGGGAAATCTGAGTTTCAATCCACCACTCCCACAAAAAAAGATTCGTGTCAAGTGATTTTTGTTAACCGATTCGTTTATGATTTCCATAGTTATCGATCTAGAGTGATATGTAGAAAATTTCTGTCTTGGCTTGAAGTAATCATGTTGCTGTTCATCTTCCTGCTGTTCCACTTGTCCACTTCCGGCGGGTTCCACATCCTTGGTTGCTCACTGCGTCCTTGTTCAAAAGGGCAGAGGATGGCCTTCTACGCTATTTCGCGGCGTTTATCGGGTGGATCGTCTGTGGCCCAGCCTTCCGTGGCCTTGCGTCTTGCTCTCTCTTCTAGATCGTATTCTACTTCGTTCAGAGAAGAAAGAGATACCTTTGGACCAATTCAAGTCCCATCCGACAAATTATGGGGAGCGCAAACTCAAAGGTCGTTGCTGAATTTTGATATCGGTGGCGAGCGTGAACGAATGCCTGAACCCATTATTCGCGCCTTTGGCATCCTAAAAAAAGCCGCTGCTAAGGTGAACTTAGAATATGGTCTTGATCCCACCATTGGCAAAGCTATAATGCAGGCAGCACAAGAAGTAGCCGAGGGAAAGCTAAATGGCCATTTTCCACTAGTTGTATGGCAAACTGGCAGCGGCACTCAAAGCAACATGAATGCTAATGAGGTTATTGCAAACAGAGCAGCTGAGATTCTTGGTCATAAACGTGGTGAAAAATTTGTGCACCCGAATGACCATGTCAATAGATCACAATCTTCTAATGACACATTCCCAACTGTAATGCACATTGCAGCTGCAATGGAAATAAATTCAAGACTAATTCCAAAACTAAAAACCTTACATTCTGCACTACATGCCAAGTCTGTTGAATTCAAAGATATTGTGAAGATTGGGCGTACCCATACTCAAGATGCAACTCCATTAACTCTTGGGCAGGAGTTTAGTGGCTATACTACACAGGTGAAGTATGGAATTGATCGAGTGATGTGCACTTTGCCCCGAATGTATCAGTTGGCACAGGGCGGAACAGCTGTTGGGACTGGATTGAATACAAAGAAGGGGTTCGATGTTAAGATAGCAGCAGCAGTAGCTGAGGAAACAAACCTTCCCTTTGTCACAGCAGAAAATAAGTTTGAGGCCTTGGCTGCCCATGACGCTTTTGTTGAAAATAGTGGAGCCCTCAACACAATTGCAGCATCTTTAATGAAGATTGCGAATGATATACGTTTATTAGGAAGTGGTCCACGTTGTGGCCTTGGTGAACTCATTCTTCCTGAAAATGAACCAGGAAGCAGTATTATGCCTGGGAAGGTTAACCCTACCCAGTGTGAGGCTCTAACAATGGTCTGTGCACAGGTCATGGGAAACCATGTAGCCATCACAGTTGGTGGAGCAAACGGTCATTTTGAACTCAATGTATATAAACCGATTATTGCAAGTTGTCTCCTGCATTCACTTAGACTGCTTGGAGATGCATCAGCTTCCTTTGAAAAGAATTGCGTAAGAGGTATCCAAGCTAATAGGGGAAGAATTTCAAAATTATTGCATGAGTCACTAATGCTTGTCACATCCTTGAACCCGAAAATTGGTTATGACAAAGCCGCAGCAGTTGCCAAGACAGCGCACAAAGAGGGAACCACTCTTAAGGAATCTGCGTTGAAGCTTGGAGTACTTACCCCTGAAGAATTTGATACTCTCGTGGTGCCTGAGAAGATGATTGGCCCAACTGATTGA 4497 0.4365 MAAERTLSFSVASVVEDVLQQHGTQLKDLDLESRKAEETASRRYEAAGWLRKMVGVVAAKDLPAEPSEEEFRLGLRSGIVLCNVINKVQPGAVPKVVESPIDSALIPDGAPLSAYQYFENVKNFLDAVQEIGLPTFEASDLEQGGKSSRIVNSVLALKSYSEWKQNGANGAWKFGGALKPTTSGKSFVRKNSEPFTNSLSRTSSINEKSLPALTSDVESNKMSVSHSLSMLVSAMLLDKKPEEVPMTKTTSRNAVSQGNASVSKLVLVDKKAENKTIVVTKKEAVIHKDRELKHTIYTTKAGMQFMQMKFHEEFSNLGRDLESQNLRSSLSCMHIDGLAHAASGYRRVLEENRKLYNQVQDLKVENIEDGTITINVSSKNGKGRRSFNFNKVFGPSATQAEVFFDMQPLVRSVLDGYNVCIFAYGQTGSGKTYTMTGPKEITEKSQGVNYRALGDLFHMADQRKDTFRYDVSVQMIEIYNEQLPLTVNTLEIRNSSHKGLSVPDASLVPVSSTLDVIDLMNLGQRNRAVGATALNDRSSRSHRHVHNPFISGGQAKTLMFVHVSPESDAVGETISTLKFAERVATVELGAARVNKDSADVKELKEQLNKKSIGQIASLKAALARRGGESEQVQHSLSGSSEKYRQKAGSELSPYHTDKRGADTLGDPLGCRQPMVDVGNIELHSNSTLKPKTQSFDLDEISTNSPPWPPVSSPGPNYGEDDKETGSGEWVDKVMVNKQDASKTENLLGHWGADNRHLSDVFYQKYLQDSPKMYADPSYNMFMGGNHFNAAGSDGMDDLDAATSDSSEHDLLWQFNHSKLPGVANIGPKLKKGPELRRKKCHPNRWTRDPKLAIEAKTRFQQIQEAYSGTYHYCIRTSEFWKQGFVDFMQEMVSMTQRESPQEYTLEDLERQLMDMMEDHGEGTGKSEFQSTTPTKKDSCQVIFVNRFVYDFHSYRSRVICRKFLSWLEVIMLLFIFLLFHLSTSGGFHILGCSLRPCSKGQRMAFYAISRRLSGGSSVAQPSVALRLALSSRSYSTSFREERDTFGPIQVPSDKLWGAQTQRSLLNFDIGGERERMPEPIIRAFGILKKAAAKVNLEYGLDPTIGKAIMQAAQEVAEGKLNGHFPLVVWQTGSGTQSNMNANEVIANRAAEILGHKRGEKFVHPNDHVNRSQSSNDTFPTVMHIAAAMEINSRLIPKLKTLHSALHAKSVEFKDIVKIGRTHTQDATPLTLGQEFSGYTTQVKYGIDRVMCTLPRMYQLAQGGTAVGTGLNTKKGFDVKIAAAVAEETNLPFVTAENKFEALAAHDAFVENSGALNTIAASLMKIANDIRLLGSGPRCGLGELILPENEPGSSIMPGKVNPTQCEALTMVCAQVMGNHVAITVGGANGHFELNVYKPIIASCLLHSLRLLGDASASFEKNCVRGIQANRGRISKLLHESLMLVTSLNPKIGYDKAAAVAKTAHKEGTTLKESALKLGVLTPEEFDTLVVPEKMIGPTD 1498
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele06g0186 1498 SUPERFAMILY Calponin-homology domain, CH-domain 36 171 IPR036872 -
Lele06g0186 1498 FunFam Fumarate hydratase class II 1441 1498 - -
Lele06g0186 1498 Pfam Calponin homology (CH) domain 41 162 IPR001715 GO:0005515
Lele06g0186 1498 Coils Coil 345 365 - -
Lele06g0186 1498 FunFam Fumarate hydratase, mitochondrial 1039 1172 - -
Lele06g0186 1498 SMART ch_5 42 160 IPR001715 GO:0005515
Lele06g0186 1498 CDD Fumarase_classII 1039 1493 IPR005677 GO:0004333|GO:0006106|GO:0045239
Lele06g0186 1498 Gene3D Kinesin motor domain 281 546 IPR036961 -
Lele06g0186 1498 ProSitePatterns Fumarate lyases signature. 1351 1360 IPR020557 GO:0003824
Lele06g0186 1498 Gene3D - 32 162 IPR036872 -
Lele06g0186 1498 Pfam Kinesin motor domain 349 543 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lele06g0186 1498 Gene3D - 1441 1498 - -
Lele06g0186 1498 Gene3D Fumarase/aspartase (Central domain) 1174 1440 - -
Lele06g0186 1498 Pfam Lyase 1046 1376 IPR022761 -
Lele06g0186 1498 TIGRFAM fumC_II: fumarate hydratase, class II 1038 1495 IPR005677 GO:0004333|GO:0006106|GO:0045239
Lele06g0186 1498 ProSiteProfiles Kinesin motor domain profile. 552 586 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lele06g0186 1498 Coils Coil 590 610 - -
Lele06g0186 1498 FunFam Kinesin-like protein KIN-14I isoform A 27 179 - -
Lele06g0186 1498 Gene3D - 1039 1173 IPR024083 -
Lele06g0186 1498 MobiDBLite consensus disorder prediction 626 664 - -
Lele06g0186 1498 SMART kinesin_4 323 594 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lele06g0186 1498 MobiDBLite consensus disorder prediction 630 646 - -
Lele06g0186 1498 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 368 608 IPR027417 -
Lele06g0186 1498 ProSiteProfiles Kinesin motor domain profile. 352 542 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lele06g0186 1498 ProSiteProfiles Calponin homology (CH) domain profile. 40 162 IPR001715 GO:0005515
Lele06g0186 1498 Coils Coil 19 39 - -
Lele06g0186 1498 Hamap Fumarate hydratase class II [fumC]. 1038 1496 IPR005677 GO:0004333|GO:0006106|GO:0045239
Lele06g0186 1498 SUPERFAMILY L-aspartase-like 1038 1494 IPR008948 GO:0003824
Lele06g0186 1498 FunFam Fumarate hydratase, mitochondrial 1173 1440 - -
Lele06g0186 1498 PRINTS Fumarate lyase superfamily signature 1351 1367 IPR000362 -
Lele06g0186 1498 PRINTS Fumarate lyase superfamily signature 1305 1332 IPR000362 -
Lele06g0186 1498 PRINTS Fumarate lyase superfamily signature 1168 1186 IPR000362 -
Lele06g0186 1498 PRINTS Fumarate lyase superfamily signature 1214 1232 IPR000362 -
Lele06g0186 1498 PANTHER ASPARTATEAMMONIA/ARGININOSUCCINATE/ADENYLOSUCCINATE LYASE 1030 1497 IPR005677 GO:0004333|GO:0006106|GO:0045239
Lele06g0186 1498 Gene3D Kinesin motor domain 549 621 IPR036961 -
Lele06g0186 1498 MobiDBLite consensus disorder prediction 696 725 - -
Lele06g0186 1498 Pfam Fumarase C C-terminus 1442 1494 IPR018951 GO:0006099|GO:0016829
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele06g0186 Lele-ChrLele06 1143415 1156332 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele06g0186 295 542 Calmodulin-binding Proteins AT5G65930 28.470 4.78e-24 108