Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele06g0183 ATGGCCACCAGAAATCGAACTGTAATATTTAGAAAGCATAGAGATGCCGTCAAGAGTGTGCGAGCCCCTTTATCTTCGTCAGCTTCTGCTTCCGGCGGTCCCGTTATTGAAATGGTGAGCACCTCACTTCTTCGTTCGAATCAATCTTCATATGCTCCTCTAAGCACCGAAGATCCAGGTCCTTCGAGAGATGCATTTACTGTGGGGTTGCCACCAGCTTGGGTAGATGATTCTGAAGAAATAGCTGCAAATATACAACGTGCTCAGTCTAAAATGTCTGAGCTCGTCAAACTTCATGCGAAGGCATTAATGCCCTCTTTTGGTGATGGTAAAGAAGATCAACAACAGATAGAGATTCTCACCCAGGAGATTACAGCTCTCTTGAGAAAATCGGAGATGAAGCTAAAAAGACTTTCTGCAACTGGCGAGTCTTCCGAGGATTCAAACATTAGAAAAAATGTTCAGCGTTCCCTTGCTACCAACCTTCAGAACTTGTCAATGGACCTCCGGCGAAAGCAGTCACAATACTTGAAACGGTTGCAGCAGCAAAAGGAGGGATATGATGGGGTTGACTTGGAGATGAATGTGAATGGGTATAAATTTGGTTTGCAGGATGATAGATTCAGTGATGTGGTCACTAAATCAGTGAATGAACTGGCTCAGATCATGAAGGACCTCTCTGTTCTTGTGATAGACCAGAATTTGTCACGATGGTCTGAGGGTTTGTCCTTAGGGGAGGCCCTTACAATTATCAAGAGAATTTTCAACTTCTTGAAAGGAAGCGGGTGTGATGGTGTTTGCCATATGCAAATATTTTCCCATTCATCTTTATCTGCCTTACGTGATTACGTGACCCTCCATTTGCACATTCTTTTGGAGTTTAGCCACCGTAGTGTTCTCGTTTTACATGACGTCAGCTATTGGCAGCTATTGTATCCTGACAATATTGGTAGTCTGGAATCCCATCATATGACCCAAACGACTTTTTCTAAGATTTTACCATTGCAGTATCATCTGGAAGTAGAGAATGAAGATGACCTTCTGTGGCAAAGTTTAGAGGATCCTTCACCTGCAATTTTCAATCTGAATGTAGATAACTTACTACTGAAAGAACTGCAAATTGGGAGATCTACCCAACAAGAATCTTTTCTATTACTAGTAATCTCTGGTTCATTTGCTGTAGCTATTGAATTGAATGTTCCCATCACATATCTCTCACATCAACGGCCGTGCATGGCAAGTCCAAGCTTCGTAGTTGCAATTAAAGTAGTAAGCAGAAAGCAAGCTGGTTCTCCACTTATATATTCATCAGAGAGCATTAACTGCATCTCGCTAACCATTGAAAAAAGCATAGGTGTTTTGATTTGTGTCATAAATGCAAAAACCAGGGGGGGCATTAAGATACCTAGAGAGATTCAAGCAGTGTTTGCTGGTTTCACTGAGTTTGCCGAGTTCACAGCAGAGGATGTGGGTACGGGCGAGAGTGGCTTGAACTCGATGGTTTTAGCGAACAATGATGAAATGGTTTTGCTGCCTCTGAACGAACCAGTGTTTGGGACGAAGCAGAAGAGTCAAATACAGACGTACTTGGAGCACAATGAAGGAGCAGAGCTACAACATCTAGCACTTGTGAGTGAAGACATGCAGGACTTTGAGGGAAAGGAGGTAGAGAAGTTTCGTAGGTGGCTTCGAGTTCATGCCTTCCCTCACCTCCAATGTATTACAAGAATTTGA 1734 0.4291 MATRNRTVIFRKHRDAVKSVRAPLSSSASASGGPVIEMVSTSLLRSNQSSYAPLSTEDPGPSRDAFTVGLPPAWVDDSEEIAANIQRAQSKMSELVKLHAKALMPSFGDGKEDQQQIEILTQEITALLRKSEMKLKRLSATGESSEDSNIRKNVQRSLATNLQNLSMDLRRKQSQYLKRLQQQKEGYDGVDLEMNVNGYKFGLQDDRFSDVVTKSVNELAQIMKDLSVLVIDQNLSRWSEGLSLGEALTIIKRIFNFLKGSGCDGVCHMQIFSHSSLSALRDYVTLHLHILLEFSHRSVLVLHDVSYWQLLYPDNIGSLESHHMTQTTFSKILPLQYHLEVENEDDLLWQSLEDPSPAIFNLNVDNLLLKELQIGRSTQQESFLLLVISGSFAVAIELNVPITYLSHQRPCMASPSFVVAIKVVSRKQAGSPLIYSSESINCISLTIEKSIGVLICVINAKTRGGIKIPREIQAVFAGFTEFAEFTAEDVGTGESGLNSMVLANNDEMVLLPLNEPVFGTKQKSQIQTYLEHNEGAELQHLALVSEDMQDFEGKEVEKFRRWLRVHAFPHLQCITRI 577
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele06g0183 577 SUPERFAMILY Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase 478 556 IPR029068 -
Lele06g0183 577 Gene3D - 471 558 IPR029068 -
Lele06g0183 577 SUPERFAMILY t-snare proteins 69 233 IPR010989 GO:0016020|GO:0016192
Lele06g0183 577 Gene3D - 71 194 - -
Lele06g0183 577 PANTHER 4-HYDROXYPHENYLPYRUVATE DIOXYGENASE 476 548 IPR005956 GO:0003868|GO:0009072|GO:0016701
Lele06g0183 577 SMART SynN_4 65 181 IPR006011 GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele06g0183 Lele-ChrLele06 1117385 1124672 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele06g0183 1 233 SNARE and Associated Proteins AT5G26980 62.879 2.92e-98 300
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele06g0183 06 1117385 1124672 Lele06g0183 06 1117385 1124672 ECH
Lele05g0366 05 2088487 2093860 Lele06g0183 06 1117385 1124672 ECH
Lele06g0183 06 1117385 1124672 Lele07g0384 07 2168058 2172196 hybridization
Lele06g0183 06 1117385 1124672 Lele08g0190 08 1155960 1161742 hybridization