Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele06g0169 ATGAGGCTGGGCATGTTTGATGGAGGGCCTCGACTCAACCTTATGGCAAGTTGGGTCCTGTCGATGTGTGCTCCAACGCTCAACAAGACCTGGCTCACGAAGCCGATGTACAGGGAATCGTTCTCCTCAGGAACATCGGCCCTTCTTTGCCCCTCTCTCCGCGTCGTCACCGCACCATCGCCATCATCGGCCCTAATTCTGATGCCTCTGGTACTGATTGGGAGATACGCCAAGACGGTTCACCAAGAAGGTTATGCTAATGTGGCTTGCGTCAATGACAAACTATTTGGAGCGGATGTGAAGGCAGCCCATCATGCTGATGCCACTGTTCTAGTAATGGGCCTGGACCAATCCCTTAAGGCTGAAACCCGGGATAGGCCCACATTGCTTATGCCCGGTCGTCAACAAGATCCTATTACACAGGTGGCAGCCTCCTCCAAGGGCCCAACTATTTTGGTCCTAATGTCTGGTGGGCGCCTTGACATAACTTTTGCAAAGAAGAATCCACGAATTGCAGGCATCTTGTGGGCCGGATATCCTGGCCAGGCCGGTGGAGCCGCCATCGTAGATATCTTGTACGGAGCCGCCAACCCAGAATGCGAGCGAGCCAACCCACAGGTTCTACAAGGGCCCAGTGGTGTACTAATTTGGCCACGGACTAGGCTACAGCCAGTTCGTGCACACGTTGGCAAGTGCGCCGACGTTGGTGTCTGTTCCGGTGTATGGGCATCGCAAGGTCAACACGACAGACATTTCAAACAAGGCAATAAGGGTGACGCATGCGAGGTGTGGAAAGCTATCCATGGCCCTTCATGTAGAGATGTTAAGAATATGGGCTTTAAGGATGGCGCTCATACCTTGTTAGTGTTCTCGGCACCACCTTCTGGGTCTCATTGGGCCCCGCACAAGCAATTGGTGGCCTTTCAGAAGGTACATGTCCCAGCCAAGGCTCAGCAACGAGTCCAAGTCAACATTCATGTTTGCAAATTCCTAAGCGTTGTTGATAAGTCTGGAATTCGAAGAATTCCTTTGGGCTCACACAATCTCCACGTTGGGGATCTCAGACACTCCGTGTCACTTCAAGCTCAGAACCTTGGGATTATCAAGAACTGA 1113 0.5229 MRLGMFDGGPRLNLMASWVLSMCAPTLNKTWLTKPMYRESFSSGTSALLCPSLRVVTAPSPSSALILMPLVLIGRYAKTVHQEGYANVACVNDKLFGADVKAAHHADATVLVMGLDQSLKAETRDRPTLLMPGRQQDPITQVAASSKGPTILVLMSGGRLDITFAKKNPRIAGILWAGYPGQAGGAAIVDILYGAANPECERANPQVLQGPSGVLIWPRTRLQPVRAHVGKCADVGVCSGVWASQGQHDRHFKQGNKGDACEVWKAIHGPSCRDVKNMGFKDGAHTLLVFSAPPSGSHWAPHKQLVAFQKVHVPAKAQQRVQVNIHVCKFLSVVDKSGIRRIPLGSHNLHVGDLRHSVSLQAQNLGIIKN 370
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele06g0169 370 SUPERFAMILY Beta-D-glucan exohydrolase, C-terminal domain 84 199 IPR036881 GO:0004553|GO:0005975
Lele06g0169 370 Pfam Glycosyl hydrolase family 3 C-terminal domain 93 199 IPR002772 GO:0004553|GO:0005975
Lele06g0169 370 Gene3D Immunoglobulins 273 367 IPR013783 -
Lele06g0169 370 PANTHER SUGAR HYDROLASE-RELATED 262 358 IPR044993 GO:0009044|GO:0045493
Lele06g0169 370 Pfam Fibronectin type III-like domain 286 353 IPR026891 -
Lele06g0169 370 SMART Fn3_like_2 285 355 IPR026891 -
Lele06g0169 370 Gene3D - 69 201 IPR036881 GO:0004553|GO:0005975
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele06g0169 Lele-ChrLele06 1026865 1028995 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele06g0169 1 360 Glycoside Hydrolase AT5G09730 33.012 3.38e-54 189
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele06g0169 06 1026865 1028995 Lele06g0169 06 1026865 1028995 ECH
Lele06g0169 06 1026865 1028995 Lele07g0369 07 2075362 2080604 hybridization
Lele06g0169 06 1026865 1028995 Lele08g0171 08 1071142 1075682 hybridization