Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele06g0165 ATGGAAAAGGCTCTTGTTGCCATGATAGTTGTCTTATCATTGACGCCGTGCTGGTATGTTATGATCAAACGCATTGAGCAGCGCGTTAATTCAAACTCACAGAATTTTCTCTTGGAGTTACAAGATGAAATTGGTCACTTTGCCAAACTATTACCCCCCATGAAGTCAACATCAGCCAATATGGCACGAATTCTAAGTTCAACCTTCAATAAGACGACTAATACCTCATTCCGTGACATTGAGACCAAAGTTGGTGGCTCCATTGTTGTTTCATGCATTCGAGATGATTCCTCAGTTGTCCGAAATCTCATACAGACGGATGCAATCAAGAGTTCCAACGGATACGCCTCACTGGGATACAAGTGGAGTGACAATCATGAGATTTTATACCTTAACTTGGTCAGAATCCCAAGAACTGGAGCTATCTCATTAGGACTTCCAGCAAAGATAATCGCAGACTTTGTCGCTCCCACTAGGCGTCAAGGTGCAAGCTTGTATTTGGCTTCCAAAGATAGCAAAGTGCTTCCACAAGGAATCCAAAATGCCCATATAGAATTCTATGATGATACGGCTTCCTTCTATTCGGTGAAACCAAATGGTGAGCTATTGAGTTATCAGGGCACCCTCTCATGTAAGGCTGAAGCCATTGCTTCTGTTCTGAAAAGGGGCACTCACTATTTGACTCGCTGCTCAACAATTGATATAATGGGAGTAGAATTGGTGTATGTCTTGGCTATCCCCCAAAATGGATTGGTGACTTTTGTACATGAGAGTAGGAAAAGGGGATTGGTGTTAATGAGCACAATGATAGTGATGTGCGTGTCTCTCATCAAACAAATGGAAGCTACTCAGCAAGCTGAGAGGAAGAGTATGAACAAGAGCCTAGCATTTGCAAGTGCTAGCCATGATATTCGTGCTTTTCTTGCTGGCCTGACTGGTTTGATAGAGATGTACTACGAAGAAGCTATCCCTGGTTCAGAACTAGAGGCCAATTTAAAACAAATGAGTGCTTGCACAGAAGCCTTACTAGGGCTATTGAATTCTATTATTGATACAAGTAAAGTTGAGGCAGGCAAAATGCAGCTTGATGAAGAGAAATTTGATCTATCCCAGTTTGTGTTTGAAGTAGATGATACTGGAAAAGGAATTCCCGAAGAGAAGCATAATTCAGTGTTTGATAATTATGTTCAAGTCAAAGACAATGCTTCAGGAGGCACTGGTTTGGGACTTGGGATTGTGCAATCCCTGGTGCGTTTGATGGATGGGGACATTGAAATTGTGGAAAAGGAAATAGGTGAAAAAGGAACATGCTTTAGATTCAATGTCCTCCTTCACGTATGTGAGACAGTCACAGGTGGTAATAGCACTAAAGAAGATAATGATTTAGGAGGTGACATAAATCTCAATCAACTTCAGGGACAAGATATAAACACCCCTAGTTCTGGTTCTAGCACAAGTTCCCCTAGCCAAAAATTACCTATTTTTGCCTCTAGTAGGTCAGGGGCTTCTTGCATTATTCTTCTGATACAAAACAAAGAGCGACGAAGGACTACTCGAAGGTTCGTGGAGAGCTTAGGGATTAGAGTTAAGGTTGTGAAGCAATGGGAACACTTGTCTCATACTCTTAAGAAGATCAAGCAAGAGAGGCGTAATTCTAGCCAGATCTCCATAGGAACATCAAACAGTAGTTCTAGGTCTACATCTCAAAATTCTAATTCCAGGGCCAAAGGATTTCCTTTGAGACCCTTTTCAGAAAGTAGCAAAATGGTGTTAGCATTCAAAAAAGACTTTGGGAGTCCTTGCAAGGTGGTTTGGTTAAATAATCCACTTGTGTCTGGAGACAATTTCAAAGCACTTGATGAAGATGCATTAGATCCTGATGACATTATCTTGTCCAAGCCATTTCATGGTAGTCGTTTGTTTGAAATCATAAGGCTTCTTCCGGAGTTTGGTGGTAGTTCAACTAATATATCTAGAAATGGAAGAATAAGGAGGGAAATTTTCATCAGTAGACTTAAGAAGCCATTCAAAGATTCCCACATGACAAGATATCAGTCACCTATATCATACACAGCAGAATTTCCCTCAGCTAATGCAACCCCATTTCAAGACCATGCTAGTTCACAAGGAGGGATCAGCTGTGCAAGTGCAGCTAGTGTGAAGGAATGCAAGAATGGCGAAGAAGTAGTGAATCTAGTTGAAGAGAGCTTAAAAGGGTCTTTTCCTTATGATTACATCATAATGGACTGTGAGATGCCAGTAATGAATGGATTTGAGGCAACAAAGCAGATAAGGAAGATGGAGAAGAGGTATGGGGTTCACATGCCTATCTTGGCCTTAACGGCTCATACGTCAGGGGAGGAGATCAACATGACCTAG 2379 0.4149 MEKALVAMIVVLSLTPCWYVMIKRIEQRVNSNSQNFLLELQDEIGHFAKLLPPMKSTSANMARILSSTFNKTTNTSFRDIETKVGGSIVVSCIRDDSSVVRNLIQTDAIKSSNGYASLGYKWSDNHEILYLNLVRIPRTGAISLGLPAKIIADFVAPTRRQGASLYLASKDSKVLPQGIQNAHIEFYDDTASFYSVKPNGELLSYQGTLSCKAEAIASVLKRGTHYLTRCSTIDIMGVELVYVLAIPQNGLVTFVHESRKRGLVLMSTMIVMCVSLIKQMEATQQAERKSMNKSLAFASASHDIRAFLAGLTGLIEMYYEEAIPGSELEANLKQMSACTEALLGLLNSIIDTSKVEAGKMQLDEEKFDLSQFVFEVDDTGKGIPEEKHNSVFDNYVQVKDNASGGTGLGLGIVQSLVRLMDGDIEIVEKEIGEKGTCFRFNVLLHVCETVTGGNSTKEDNDLGGDINLNQLQGQDINTPSSGSSTSSPSQKLPIFASSRSGASCIILLIQNKERRRTTRRFVESLGIRVKVVKQWEHLSHTLKKIKQERRNSSQISIGTSNSSSRSTSQNSNSRAKGFPLRPFSESSKMVLAFKKDFGSPCKVVWLNNPLVSGDNFKALDEDALDPDDIILSKPFHGSRLFEIIRLLPEFGGSSTNISRNGRIRREIFISRLKKPFKDSHMTRYQSPISYTAEFPSANATPFQDHASSQGGISCASAASVKECKNGEEVVNLVEESLKGSFPYDYIIMDCEMPVMNGFEATKQIRKMEKRYGVHMPILALTAHTSGEEINMT 792
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele06g0165 792 MobiDBLite consensus disorder prediction 551 577 - -
Lele06g0165 792 Gene3D - 372 440 IPR036890 -
Lele06g0165 792 Pfam Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 346 444 IPR003594 -
Lele06g0165 792 SUPERFAMILY Homodimeric domain of signal transducing histidine kinase 280 360 IPR036097 GO:0000155|GO:0007165
Lele06g0165 792 SMART HKATPase_4 333 446 IPR003594 -
Lele06g0165 792 Gene3D - 279 361 - -
Lele06g0165 792 Pfam Response regulator receiver domain 718 786 IPR001789 GO:0000160
Lele06g0165 792 SUPERFAMILY CheY-like 720 787 IPR011006 -
Lele06g0165 792 CDD REC_hyHK_CKI1_RcsC-like 719 789 - -
Lele06g0165 792 ProSiteProfiles Histidine kinase domain profile. 340 446 IPR005467 -
Lele06g0165 792 SMART HisKA_10 292 358 IPR003661 GO:0000155|GO:0007165
Lele06g0165 792 CDD HisKA 293 354 IPR003661 GO:0000155|GO:0007165
Lele06g0165 792 PANTHER TWO-COMPONENT HISTIDINE KINASE 237 372 - -
Lele06g0165 792 PRINTS Bacterial sensor protein C-terminal signature 372 386 IPR004358 GO:0016310|GO:0016772
Lele06g0165 792 PRINTS Bacterial sensor protein C-terminal signature 404 422 IPR004358 GO:0016310|GO:0016772
Lele06g0165 792 PRINTS Bacterial sensor protein C-terminal signature 390 400 IPR004358 GO:0016310|GO:0016772
Lele06g0165 792 SUPERFAMILY ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 370 442 IPR036890 -
Lele06g0165 792 MobiDBLite consensus disorder prediction 546 580 - -
Lele06g0165 792 Gene3D - 711 792 - -
Lele06g0165 792 ProSiteProfiles Response regulatory domain profile. 688 792 IPR001789 GO:0000160
Lele06g0165 792 MobiDBLite consensus disorder prediction 471 494 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele06g0165 Lele-ChrLele06 1006528 1010585 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele06g0165 371 788 Histidine Kinase Gene Family AT2G47430 35.283 1.99e-74 261
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Lele06g0165 HATPase_c 4.2e-18 CL0025