Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele06g0161 ATGGCTTCGAATCACCGTCCGGCAAGTTCGGGATCTGATGACCCAAGATCTGATGTTATGGACGAGAGGAAGAGGAAGAGGATGCAATCTAACCGTGAATCCGCGAGGCGATCGCGGATGAAGAAGCAGAAGCAACTTGAAGATCTGACCAATGAGATCAGCCGATTGCAAAGTGCAAACAGTCTTTTAGTTCAGAACATAAAGGAAAAGGAGGATGCATACAATGAGATTGAATCCAACAGCACTGTCCTTAGGGCGCAGACTGCGGAGTTATTCGAACGATTGCGTTTTCTAAACTCGATACTTGAGATCGCTGAAGAGGTCAGTGGGCTCTCTGTTGAGATCCCCGAGATACCAGATCCTCTCCTGAAGCCATGGCAGCTTCCTTATCCGATACAGCAGATCACGGCTTCTTCAAACTTCGTCCTGCATTGA 435 0.4805 MASNHRPASSGSDDPRSDVMDERKRKRMQSNRESARRSRMKKQKQLEDLTNEISRLQSANSLLVQNIKEKEDAYNEIESNSTVLRAQTAELFERLRFLNSILEIAEEVSGLSVEIPEIPDPLLKPWQLPYPIQQITASSNFVLH 144
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele06g0161 144 SMART brlzneu 19 83 IPR004827 GO:0003700|GO:0006355
Lele06g0161 144 PANTHER BZIP TRANSCRIPTION FACTOR 44 8 107 - -
Lele06g0161 144 MobiDBLite consensus disorder prediction 11 49 - -
Lele06g0161 144 FunFam BZIP transcription factor 21 72 - -
Lele06g0161 144 MobiDBLite consensus disorder prediction 1 50 - -
Lele06g0161 144 Coils Coil 32 87 - -
Lele06g0161 144 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 21 84 IPR004827 GO:0003700|GO:0006355
Lele06g0161 144 Pfam bZIP transcription factor 23 80 IPR004827 GO:0003700|GO:0006355
Lele06g0161 144 CDD bZIP_plant_GBF1 24 75 IPR045314 GO:0003700|GO:0006355
Lele06g0161 144 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 26 41 IPR004827 GO:0003700|GO:0006355
Lele06g0161 144 SUPERFAMILY Leucine zipper domain 23 76 IPR046347 GO:0003700|GO:0006355
Lele06g0161 144 Gene3D - 21 75 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele06g0161 Lele-ChrLele06 975025 975459 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele06g0161 1 141 bZIP Transcription Factor Family AT3G62420 53.846 7.76e-46 144
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Lele06g0161 bZIP_1 1e-09 CL0018
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele06g0161 06 975025 975459 Lele13g2120 13 28016581 28016955 CCT
Lele06g0161 06 975025 975459 Lele15g0292 15 1650909 1651283 CCT
Lele06g0161 06 975025 975459 Lele16g0305 16 1694369 1694881 CCT
Lele13g2130 13 28073026 28076132 Lele06g0161 06 975025 975459 CCT
Lele14g2055 14 26403677 26406177 Lele06g0161 06 975025 975459 CCT
Lele15g0281 15 1593307 1596548 Lele06g0161 06 975025 975459 CCT
Lele16g0296 16 1639541 1650490 Lele06g0161 06 975025 975459 CCT
Lele06g0161 06 975025 975459 Lele06g0161 06 975025 975459 ECH
Lele05g0342 05 1943836 1944676 Lele06g0161 06 975025 975459 ECH
Lele06g0161 06 975025 975459 Lele07g0360 07 2001905 2003249 hybridization
Lele06g0161 06 975025 975459 Lele08g0164 08 1006112 1006546 hybridization