Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele06g0157 ATGGATGGTACTGCATCCCCAAAACTTGAATCACAAGCATCTCAAGAGCTCAACCCAAAAGAAGCTCAACCACTCAAAAAACGGAAAACAGTTCAGAAGACAGTTGTGACATTGAGAGTTGGAGAAAATGAAAGCAAACTTAAGAACGAAGGGCTGGCTCCTGATTCCTGGTGTTGGAGAAAATATGGACAAAAGCCTATTAAAGGATCACCCTACCCAAGGGGCTACTACAGGTGCAGCACATCCAAGGGTTGTTCAGCCAGAAAGCAAGTAGAGAGATGCAGAACAGATGCTTCAATGCTTATCGTTACTTATACCTCTACTCATAACCATCCACCTCCTGATCGTCCCTCCAGCTCCAATCTAAACCCACCACAAAAATCCCAAAACCAGACCGTAGAAGAGAAAGAAGAGAAAGTGGAAGAGCAAGAAGAGAGAGAAAGGGAAAAGGATCATAAGCCAACGACGGGCCGTGATCAATGTGTGAAGGAAGAAAATTTCTATTACTTGCAATCGCCAATTCAGTGCTCACAATACATTATTGTTGACCAAGAAGATCCTTTCGAAGTGAACCCAGAGAAAACACACGGTAGAATTGATCTCCTCCTAGAAAAAGAGCTCCCGAGTTATTCTCAGTTCGAGAAACCGTCGTCAACACCCACATCCGAAGAACATGACTTTTTCGATGAACTTGAAGAGCTGCCCATATCTTCACCTTTCTTAAACTTAATGAAGCGAAATGTCTCCGAGGAAAGGATTGTGGTTACCCCTTCATGA 777 0.435 MDGTASPKLESQASQELNPKEAQPLKKRKTVQKTVVTLRVGENESKLKNEGLAPDSWCWRKYGQKPIKGSPYPRGYYRCSTSKGCSARKQVERCRTDASMLIVTYTSTHNHPPPDRPSSSNLNPPQKSQNQTVEEKEEKVEEQEEREREKDHKPTTGRDQCVKEENFYYLQSPIQCSQYIIVDQEDPFEVNPEKTHGRIDLLLEKELPSYSQFEKPSSTPTSEEHDFFDELEELPISSPFLNLMKRNVSEERIVVTPS 258
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele06g0157 258 Coils Coil 126 153 - -
Lele06g0157 258 MobiDBLite consensus disorder prediction 1 30 - -
Lele06g0157 258 Pfam WRKY DNA -binding domain 55 112 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lele06g0157 258 ProSiteProfiles WRKY domain profile. 48 114 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lele06g0157 258 SUPERFAMILY WRKY DNA-binding domain 51 114 IPR036576 GO:0003700|GO:0006355|GO:0043565
Lele06g0157 258 PANTHER WRKY TRANSCRIPTION FACTOR 30-RELATED-RELATED 11 239 IPR044810 GO:0003700
Lele06g0157 258 Gene3D WRKY domain 41 115 IPR036576 GO:0003700|GO:0006355|GO:0043565
Lele06g0157 258 MobiDBLite consensus disorder prediction 1 19 - -
Lele06g0157 258 MobiDBLite consensus disorder prediction 103 162 - -
Lele06g0157 258 MobiDBLite consensus disorder prediction 103 130 - -
Lele06g0157 258 MobiDBLite consensus disorder prediction 131 160 - -
Lele06g0157 258 FunFam WRKY transcription factor 65 37 114 - -
Lele06g0157 258 SMART WRKY_cls 53 113 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele06g0157 Lele-ChrLele06 957880 958876 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele06g0157 47 240 WRKY Transcription Factor Family AT4G01250 40.206 7.68e-35 125
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Lele06g0157 WRKY 7.2e-24 CL0274
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele06g0157 06 957880 958876 Lele06g0157 06 957880 958876 ECH
Lele06g0157 06 957880 958876 Lele07g0356 07 1985874 1986897 hybridization
Lele06g0157 06 957880 958876 Lele08g0160 08 989758 990764 hybridization