Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele06g0142 ATGATAGGGCAGTCTGCAGCAAATCGAAGTGAAGACGATATGTGTGTGAGGAAAGGTCCATGGACTGTTGAAGAGGATACCATTCTCGCCAATTACGTAGCCACTCAAGGTGAAGGTCGGTGGAATTTTGCCGCTCGCTGTTCAGGTCTGAATAGAACGGGGAAGAGTTGCAGATTGAGATGGCTGAACTACTTGCGTCCCGGTGTTCGGCGTGGAAACATCACACTCCAGGAGCAGATATTGATTCTCGACCTCCATTCTCGCTGGGGAAACAGGTGGTCCAAAATTGCGGAGCATTTGCCCGGAAGAACAGACAACGAGATAAAGAATTATTGGAGAACCAGAGTGATAAAGCAGGCGAAGCAGCTCCAGTGTGACGTCAACAGCAAACAGTTCAGAGACGCCATGCGTTACGTTTGGATTCCCCGCTTGCTGGAGCGGATTCGGGCCTCGTCCGAATATCGACACGGTTCGGGAACAGAGTGGAGAAGACCCGATTACTCTTGCACCCCTCCCCATGCGGGATCGGAGCTTCAAGTGGCTTCGAATTCAGACAGCAGTGAAACGTCGGGTCATCCAATAGGAAACGGGTCGGTGACCCAGACAGTAGAGCAGGGAGACGCACCGGAGAATCTATGGAGCGACGAGAATATATGGTTTTTACGGCAACAATTTTGTGATGAGTTCTGA 690 0.5101 MIGQSAANRSEDDMCVRKGPWTVEEDTILANYVATQGEGRWNFAARCSGLNRTGKSCRLRWLNYLRPGVRRGNITLQEQILILDLHSRWGNRWSKIAEHLPGRTDNEIKNYWRTRVIKQAKQLQCDVNSKQFRDAMRYVWIPRLLERIRASSEYRHGSGTEWRRPDYSCTPPHAGSELQVASNSDSSETSGHPIGNGSVTQTVEQGDAPENLWSDENIWFLRQQFCDEF 229
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele06g0142 229 MobiDBLite consensus disorder prediction 175 200 - -
Lele06g0142 229 Gene3D - 75 116 - -
Lele06g0142 229 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 66 120 IPR017930 -
Lele06g0142 229 MobiDBLite consensus disorder prediction 173 200 - -
Lele06g0142 229 SMART sant 17 67 IPR001005 -
Lele06g0142 229 SMART sant 70 118 IPR001005 -
Lele06g0142 229 ProSiteProfiles Myb-like domain profile. 17 65 IPR001005 -
Lele06g0142 229 FunFam Myb transcription factor 18 70 - -
Lele06g0142 229 Gene3D - 19 70 - -
Lele06g0142 229 ProSiteProfiles Myb-like domain profile. 66 116 IPR001005 -
Lele06g0142 229 SUPERFAMILY Homeodomain-like 16 112 IPR009057 -
Lele06g0142 229 CDD SANT 75 114 IPR001005 -
Lele06g0142 229 CDD SANT 20 65 IPR001005 -
Lele06g0142 229 FunFam MYB transcription factor 75 138 - -
Lele06g0142 229 Pfam Myb-like DNA-binding domain 71 114 IPR001005 -
Lele06g0142 229 Pfam Myb-like DNA-binding domain 18 65 IPR001005 -
Lele06g0142 229 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 13 65 IPR017930 -
Lele06g0142 229 PANTHER MYB TRANSCRIPTION FACTOR-RELATED-RELATED 15 187 IPR044676 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele06g0142 Lele-ChrLele06 857263 858214 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele06g0142 11 226 MYB Transcription Factor Family AT2G47190 52.400 4.41e-77 231
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Lele06g0142 Myb_DNA-binding 2e-14 CL0123