Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele06g0128 ATGGATGACTGCTGTGCTGTTTGCGCCGAACCTTTGGAATGGGTTGCTTACGGTCCCTGTTTGCATCGGGAGGTTTGCTCGACCTGCGTAGCTCGTCTCCGTTTCATATGTGATGATCGCCGTTGTTGCATCTGCAAGACCCTGTGCGACCGTGTTTTTGTCACAAAGGCTCTAGGTGATTTTACAAGGATGATTAATAACTTTTCGGTGCTGCCATCAGATGTAAGGGAGGGTCAGGTGGGTTCATACTGGTACCATGAAGATACAAATGCTTTTTTTGATGATATGGACCACTACAAGATGATCAAAGCTATGTGCAAGCTCTCATGTAGCGTATGTGACAAGATAGAGGAGCAAGCACCTGATGCCCCAAAGCGTCAAGCAAGGTTTCGGAATATAGAACAGCTAAAGGGTCACTTGTTCCGCTTTCACAGGATGCTCATGTGCAGTTTATGTTTGGAAGGAAGGAAGGTATTCATTTGTGAACAAAAGCTTTATACTAGAGCACAGTTAAATCAGCATATAAGCACAGGTGATTCGGAGGTGGATGGAAGTGAGAGCGAGAGAGGTGGTTTTATGGGGCATCCTATGTGTGAATTCTGCCGAACCCCATTTTATGGGGATAATGAACTATACACTCATATGTCAACAGAACATTTTACTTGTCATATATGCCAAAGGCAACATCCAGGACACTACGAGTATTATAAGAATTATGATGACTTAGAGACCCACTTCCGTCAAGAGCACTTCTTATGTGAAGATGAAGCTTGCCTTGCTAAAAAGTTCATTGTATTTCAATCTGAAGCAGAGATGAAGAGGCACAATGCTATTGAACATGGAGGGCGAATGTCAAGGTCAAAACGTAATGCTGCTCTTCAGATTCCAACTAGCTTCCGATACAGACACGGTAATCAACAAGATCAACGGCGTGGAAGAGGTCGGACATTTCGTCGTGATCTTTCTGAAAGTGAACTTTCTAACACAGCTAGTGTAGAGAGCACTAGTCATGATCCAGCTACATCAAGCAGTGGAGAAGTTTCTCTTGGTTATGGAAACTTTGATCATGAGCCAGGCATCCAATCATCTGAATCCTTAGCTACATCAAGTTCTGAATTGGCTTCAAGATACCTCCAAGCCTTGGGACATTCAAGGAGTTCACCATTGGGAGATTCCTCGTTTCCTCCACTTCCCATAGCATCTATCAATGGCCAAGCAATGGCCAAGAATGAGCCCGAAGCTTCATCTAGTAACACTATGGCGGCACATTTGCGTCGGCATAGCAACATAAATGTATCTGCTCTTAATTCTGCTAATGGATGGCGAGTTGCAAGTCATGGATCTGTGCAATCATCAAGTAATCCTGTGCAATATAAAAAGCCAACAAATGTTGCTCCTGGATTGTCAGGTAATTCCAGTCAGACAAAGACTGCTATTAACCATGGACCTGCGGCTTCAACCTATGCTAGTTCTGTCCAGGCTACAAAGAGAACTGCTCATGGACATTTGTCTCCTGGCACGTCAAGGGAAATACGTGACAATGGTAGAATCATTCATTCTGCTTCTGCTCCAAATCTCATTGAAAGTGGTCCTTTGGAAGCTTCATTTTCTGATTTTCCTCCAGTATCTGCTACACAAGCAAACAAGTTGCCTGCAAGTAGCCAGTCTTCGACAACGATGAATGTAGAGAATGTTCATTCTGCTAACAAGTCCTTGGTTGAAAAGATTCGTAGTGCTCTTGATTTTGATCCTGATAGTTACACCATTTTTAAAGACATTTCTGCACAATATCGCCAAGGAATAATTGATACAGGCACATATTTGGATTATGTGCAGCAGTTTGGCTTGTCTCATCTTGTACTTGAGTTAGCTAGACTGTGCCCTGATCCACAGAAGCAGAAAGAACTTGTTGATTCTTACAATGCGAGTTTGCGAAGAACTGCTTTACAAGAAAATGATTGGGGTGGCAGTAGTATCCATCACAAAGATGGCAAGGTCTCCAAGAAAGGGAAAGGGAAAGGTAAAGGTAAAGGGAAGTGTATGGATATTGAAGAGAGGAAATCTAAGGAGAGTGTAGAAGATAGCTTTCTAAGCACCGTACGTCAATTACAGTTGAATCATAAACCTTCAGAAGACAATGCTGAGGTACTATCTAGGGGTGATTACCGTAGTGCCAAAGGTAAGTGGAAAATCTTGGCTGAGGAACAACTGATTGGTACAAATTCTCATAGTCTACCCAACCCAAAGCATGCTGGGCAGAGTGAAGCATCACATGGCAGTTTTCCTAACCAAAGTAAAGAAGCGGGAGCTAGTGGGAGCAAGCAACGCAAGAAAAGTTCTAAGTTCATTAGAATGCGCCTTGGTGATGGTTCTGTAGAAACATTGTTGGATCTTAAGAGTTCAAATGCCAACTCAGATCCTGGATCAACAGAGGCCTTGGATGGTAATAAGGATGATGCCGGAGGACTGCCTGTGCGAGGTGTCTGGCGGAATGGAGGAGGTCATAAACTCTTTTCCTAG 2520 0.4345 MDDCCAVCAEPLEWVAYGPCLHREVCSTCVARLRFICDDRRCCICKTLCDRVFVTKALGDFTRMINNFSVLPSDVREGQVGSYWYHEDTNAFFDDMDHYKMIKAMCKLSCSVCDKIEEQAPDAPKRQARFRNIEQLKGHLFRFHRMLMCSLCLEGRKVFICEQKLYTRAQLNQHISTGDSEVDGSESERGGFMGHPMCEFCRTPFYGDNELYTHMSTEHFTCHICQRQHPGHYEYYKNYDDLETHFRQEHFLCEDEACLAKKFIVFQSEAEMKRHNAIEHGGRMSRSKRNAALQIPTSFRYRHGNQQDQRRGRGRTFRRDLSESELSNTASVESTSHDPATSSSGEVSLGYGNFDHEPGIQSSESLATSSSELASRYLQALGHSRSSPLGDSSFPPLPIASINGQAMAKNEPEASSSNTMAAHLRRHSNINVSALNSANGWRVASHGSVQSSSNPVQYKKPTNVAPGLSGNSSQTKTAINHGPAASTYASSVQATKRTAHGHLSPGTSREIRDNGRIIHSASAPNLIESGPLEASFSDFPPVSATQANKLPASSQSSTTMNVENVHSANKSLVEKIRSALDFDPDSYTIFKDISAQYRQGIIDTGTYLDYVQQFGLSHLVLELARLCPDPQKQKELVDSYNASLRRTALQENDWGGSSIHHKDGKVSKKGKGKGKGKGKCMDIEERKSKESVEDSFLSTVRQLQLNHKPSEDNAEVLSRGDYRSAKGKWKILAEEQLIGTNSHSLPNPKHAGQSEASHGSFPNQSKEAGASGSKQRKKSSKFIRMRLGDGSVETLLDLKSSNANSDPGSTEALDGNKDDAGGLPVRGVWRNGGGHKLFS 839
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele06g0128 839 MobiDBLite consensus disorder prediction 741 770 - -
Lele06g0128 839 ProSiteProfiles Zinc finger RING-type profile. 5 46 IPR001841 -
Lele06g0128 839 MobiDBLite consensus disorder prediction 445 514 - -
Lele06g0128 839 SMART c2h2final6 108 144 IPR013087 -
Lele06g0128 839 SMART c2h2final6 220 250 IPR013087 -
Lele06g0128 839 SMART c2h2final6 251 280 IPR013087 -
Lele06g0128 839 SMART c2h2final6 196 219 IPR013087 -
Lele06g0128 839 MobiDBLite consensus disorder prediction 445 502 - -
Lele06g0128 839 MobiDBLite consensus disorder prediction 323 349 - -
Lele06g0128 839 MobiDBLite consensus disorder prediction 653 686 - -
Lele06g0128 839 MobiDBLite consensus disorder prediction 741 786 - -
Lele06g0128 839 MobiDBLite consensus disorder prediction 798 839 - -
Lele06g0128 839 PANTHER ZINC FINGER PROTEIN 598 1 743 IPR044288 GO:0061630|GO:0072344
Lele06g0128 839 MobiDBLite consensus disorder prediction 295 367 - -
Lele06g0128 839 CDD RING-HC_ZNF598 5 46 IPR041888 -
Lele06g0128 839 MobiDBLite consensus disorder prediction 304 322 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele06g0128 Lele-ChrLele06 786744 791780 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele06g0128 1 839 C2H2 Transcription Factor Family AT3G62240 52.059 0.0 793
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele06g0128 06 786744 791780 Lele06g0128 06 786744 791780 ECH
Lele06g0128 06 786744 791780 Lele07g0330 07 1823257 1828352 hybridization
Lele06g0128 06 786744 791780 Lele08g0132 08 806257 811311 hybridization