Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele06g0125 ATGGAAGCTAGATCTGGACCGGAAGCTTTTCACTTTTATGGAATTGGTTCATCGGATTTGAGTGGAGTGGGGAAGAGGTCTGTTGAATGGGATTTAAACGATTGGAAATGGGATGGGGATCTTTTTATAGCTAGCCAGCTGACACCAGTGCCAGAAGATAGCGTAGGCCGACAATTTTTCCCTCTTGGGTCTGGGATCCCCATGGCCGGGGGGTCCTCTAACAGTTCTTCCTCTTGCTCGGATGAAGTAAATCTAGAGATGGACAAGCGGAAGAATGAAGGAGAAAGGAAAAGGAGGGTTATTGTGGTGGAGGATGACAGCTTGAATGAGGGAGCAGGTGCCCTTAGCTTAAAGCTTGGGGGGCATGACTCTCCAATTACTGATAGGGAGGTGGCAACTTGGGAAGGAATGAATGGAAAGAAAACCAGATTAGCTGGAGGCACTTCAAATCGAGCTGTTTGTCAGGTGGAGGACTGTGGTGCAGATCTGAGCAGTGCTAAGGATTATCATAGGCGCCATAAAGTCTGTGAGATGCACTCAAAGGCCAGTAGGGCACTTGTGGGGAATGTAATGCAGCGGTTCTGTCAGCAATGTAGTCGGTTTCACATCCTTCAGGAGTTTGATGAAGGAAAGAGAAGTTGTCGGAGGCGCTTGGCAGGCCACAATAAAAGGAGGAGGAAAACAAATAATGATGCTGTTCCTAATGGCAGTTCAATAAACGATGATCAGACTAGCAGTTATCTGTTGATTACATTGTTGAAGATACTTTCAAACATGCATTCTAACATGTCAAATCAGGCCGCAGATCAGGATCTGCTGTCTCATCTTCTAAAGAGCTTAGCTAATAAAAATGGTGAACCTGGGGCCAAGAGCTTGTCTAACCTTTTGCGGGAACCTGAGAATTTGTTGAAAGGGAGCTCTCCTGATAAATCAGATATGATTTCTGCTTTATTCTCAAATGGTTCTCAAGTCTCTCCAACTGTTATAAGACAACCGCAAACAATATCTATGACTGAAATTCAACATCAAGGGGTGCCTGATACTGGGGCTGCTGATCAACAGACCATGTCTTCTACTAAACCTAGCATTACAAACAGTCCTCCAGTTTACTCAGAAGCCAGGGACAGTGTTCCTGAACAGGTCAAGATGAATAATTTTGATTTGAATGACATATATATTGACTCAGATGATGGCATAGAAGATATTGAACGATTGCCTGTCTCTGCAAACCTTGGGGCTAGTTCTCTTGATTATCAGTGGGCACAACAAGACTCTCATCAATCAAGCCCACCTCAGACAAGTAGAAATTCAGATTCTGCATCTGCCCAGTCCCCTTCTAGTTCAAGTGGAGAAGCTCAGAGCCGCACAGATCGAATTGTTTTTAAGCTCTTTGGTAAAGAACCAAATGATTTTCCTCTTGTACTTAGAGCACAGATTATTGACTGGTTATCCCACAGTCCTACTGACATTGAGAGCTATATACGGCCTGGATGTATTGTGTTGACTATTTATCTGCGTCAGACGGAGGCTGTATGGGAGGAGCTTTGCTATGATCTTGCTTTGAGTTTGAATAGGCTCATCGAAGCCTCAAACTGTGACTTTTGGAGAACTGGATGGGTTTACACAAGAGTGCAGCATCAGATAGCCTTCCTTTTCAATGGTCAGGTTGTCATAGACAAATCTTTACCTCTAAGAAGTAAAAATTATAGTAAGATTGTGAGTGTTAGTCCGATTGCTGTACCAGCATCCAAAACAGCTCAATTTTCAGTCAAGGGTATTAATCTGATTCGCCCAGCCACCAGGTTATTATGTGCTCTAGAAGGGAAATATATGGTCTGTGAAGATGCTCAGGAGCCCACGGAGCAGTGCTCCAAAGAGCTTGATGAGCTACAGTGCGTCCAATTTTCTTGTTCTGTTCCTGTGATGAATGGAAGAGGATTTATTGAGATTGAGGACCAGGGCTTGAGCAGCAGCTTTTTTCCTTTCATAGTTACAGAAGAGGATGTTTGCTCCGAAATCTGTGCCCTTGAGCCTCTACTAGAATCAGGCAAAGCTGATTCTGATATTGGAGGATCTGGGAAATTTATGGCCATAAGTCAGGCCATGGATTTCATTCATGAAATGGGCTGGCTTCTTCACAGGAGCCAATTGAAATCTAGGATGGTTCACCTAAACTCTAGTGTAGAACTTTTTCCATTAAAACGGTTCAAGCAGCTCATGGAGTACTCTATGGACCATGATTGGTGTGCAGTGGTGAAGAAACTGTTGAACCTTTTACTTGATGGAACAGTGGACTTAGAAGATCACCCATCCCTGTATTTTCCACTTTCAGAAATGGGTCTTCTTCATAAAGCAGTAAGGAGGAATAGCAGACAGTTGGTGGAGTTGCTTTTGAGATATGTGCACGACAAAATTTATGATAAACTAGGACCTGAAAACGATGCACTAGCTGGCATTGGGAACCAGAGCTTCTTGTTTAGACCTGACATTGTTGGTCCTGCTGGCTTGACACCACTTCATATTGCAGCTGGGAAAGATGGTTCTGAGGATATATTGGATGCTTTAACTAATGATCCTTGCATGGTAGGAATTGAAGCATGGAAGAGTGCCCGTGACAGCACAGGCTTTACACCTGAAGATTATGCACGCTTACGGGGTCATTATGCATACATTCACTTGGTTCAGAAGAAAATCAACAAGAGACAAGCTGCAGCAGCATCTCATGTGTTGGTAGATATCCCCAGCAATCTGACTGAGTCTAGTATACATCAGAAGCAAACGGAGTCTTCCACTAGCTTCGAGATCGGAAAGGCAGAAAGAAGCCGTCGACAAGTGCTATGCAAACTTTGCGACCATAAATTGTCTTGTAGGACTGCAGTTGGAAGGTCTTTAGTGTATAAGCCTGCCATGCTCTCAATGTTGGCCGTAGCAGCAGTGTGTGTCTGCGTGGCCCTTCTGTTCAAAAGCTCGCCTGAAGTTCTGTACGTGTTCCAACCCTTCAGGTGGGAATCACTGGATTTCGGAACAAGCTGA 3033 0.4421 MEARSGPEAFHFYGIGSSDLSGVGKRSVEWDLNDWKWDGDLFIASQLTPVPEDSVGRQFFPLGSGIPMAGGSSNSSSSCSDEVNLEMDKRKNEGERKRRVIVVEDDSLNEGAGALSLKLGGHDSPITDREVATWEGMNGKKTRLAGGTSNRAVCQVEDCGADLSSAKDYHRRHKVCEMHSKASRALVGNVMQRFCQQCSRFHILQEFDEGKRSCRRRLAGHNKRRRKTNNDAVPNGSSINDDQTSSYLLITLLKILSNMHSNMSNQAADQDLLSHLLKSLANKNGEPGAKSLSNLLREPENLLKGSSPDKSDMISALFSNGSQVSPTVIRQPQTISMTEIQHQGVPDTGAADQQTMSSTKPSITNSPPVYSEARDSVPEQVKMNNFDLNDIYIDSDDGIEDIERLPVSANLGASSLDYQWAQQDSHQSSPPQTSRNSDSASAQSPSSSSGEAQSRTDRIVFKLFGKEPNDFPLVLRAQIIDWLSHSPTDIESYIRPGCIVLTIYLRQTEAVWEELCYDLALSLNRLIEASNCDFWRTGWVYTRVQHQIAFLFNGQVVIDKSLPLRSKNYSKIVSVSPIAVPASKTAQFSVKGINLIRPATRLLCALEGKYMVCEDAQEPTEQCSKELDELQCVQFSCSVPVMNGRGFIEIEDQGLSSSFFPFIVTEEDVCSEICALEPLLESGKADSDIGGSGKFMAISQAMDFIHEMGWLLHRSQLKSRMVHLNSSVELFPLKRFKQLMEYSMDHDWCAVVKKLLNLLLDGTVDLEDHPSLYFPLSEMGLLHKAVRRNSRQLVELLLRYVHDKIYDKLGPENDALAGIGNQSFLFRPDIVGPAGLTPLHIAAGKDGSEDILDALTNDPCMVGIEAWKSARDSTGFTPEDYARLRGHYAYIHLVQKKINKRQAAAASHVLVDIPSNLTESSIHQKQTESSTSFEIGKAERSRRQVLCKLCDHKLSCRTAVGRSLVYKPAMLSMLAVAAVCVCVALLFKSSPEVLYVFQPFRWESLDFGTS 1010
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele06g0125 1010 Pfam SBP domain 154 227 IPR004333 GO:0003677
Lele06g0125 1010 MobiDBLite consensus disorder prediction 68 82 - -
Lele06g0125 1010 Gene3D - 145 215 IPR036893 GO:0003677|GO:0005634
Lele06g0125 1010 MobiDBLite consensus disorder prediction 420 454 - -
Lele06g0125 1010 MobiDBLite consensus disorder prediction 344 371 - -
Lele06g0125 1010 SUPERFAMILY SBT domain 152 232 IPR036893 GO:0003677|GO:0005634
Lele06g0125 1010 ProSiteProfiles Zinc finger SBP-type profile. 151 228 IPR004333 GO:0003677
Lele06g0125 1010 PANTHER SQUAMOSA PROMOTER-BINDING-LIKE PROTEIN 4 78 893 IPR044817 GO:0003677
Lele06g0125 1010 MobiDBLite consensus disorder prediction 344 375 - -
Lele06g0125 1010 MobiDBLite consensus disorder prediction 218 239 - -
Lele06g0125 1010 FunFam Squamosa promoter-binding-like protein 14 145 215 - -
Lele06g0125 1010 SUPERFAMILY Ankyrin repeat 776 894 IPR036770 -
Lele06g0125 1010 Gene3D - 737 911 IPR036770 -
Lele06g0125 1010 MobiDBLite consensus disorder prediction 67 91 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele06g0125 Lele-ChrLele06 772978 778857 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele06g0125 1 1010 SBP-box Gene Family AT3G60030 56.226 0.0 994
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF SBP Lele06g0125 SBP 1.5e-29 No_clan