Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele06g0123 ATGTCTGGATGTGTGAGCAAAAACGACTACAATGTCGTCGCTTGTGCGCCTGAGGCGGCAGGTAGCGGAAGAGCAGAGCCGCAATACGCCTCAGCGAAGATCTCTGTGTGGTGGGACATTGAGAACTGCCAAGTTCCAAAGGGCTGCGATGCTCACGCCATTGCTCAGAATATTAGTTCTGCACTCGTCACGATGAACTACTGTGGTCCCGTCTCCATCTCCGCCTACGGCGACACAAGTCGGATCCCATCCTTCGTTCAGAAAGCACTCTCTAGCACCGGAATTTCGCTCAACCACATTCCGACTGGTGTGAAAGATGCCAGTGATAAGAAAATTCTAGTTGATATGTTGTTATGGGCAGTAGACAACCCTGCTCCAGCAAATTATCTGCTGATTTCTGGAGATAGGGATTTCTCAAATGCTCTGCATCAGTTGCGCCTAAGAAAATACAATATTCTTCTAGCACAACCACCAAAAGCATCAGCTCCTCTAGTTGCAGCAGCAAAATGTGTATGGCTCTGGACGAGCCTTTTATCTGGTGGGGCCCCACTATCAAGTGCCAAATTGTTATGCCTTGCAAGTGGTAACCATGTCTCTAATTCTGGGAGCATTCAAAACCCGGTTGCTGAGCCAAATCAAATTAGTCAGCCACTGTTTCTCAATTCTGAAAACCTTGATATGGGCAGTCAAAATACCTATACTACTAGAAGCGTTGCTGATTTGAAACACAAAGTAAACTATGTTTTGAAAACTGACAATCAGCCCAACCTATCAAGCTCTTCAAGCTTACCTGTTACAGTTTCAGGGGGTAAGAACAATGATCCTCTTAAACTAGCACAGTCACCAGTGAAGCTGTTCCCAAAAGCTCCACATGAATTCTTCTTTAGTAGCAAGCCCGTAGTCCCAAACGGTAGGTTCACTCCTAACCTTCCAAGCAACCAAGATTGCTCAGAAAATGAAAGGGGCAACTCTAATGAAATCCATCAGGATGCCTATCATAGTTCTTCGAGGTCAAACAACCTTCATATACAGCCCATGTCTGGACCGAATTTACTTCTTCCTGTTCCTGATTCTCACACTGGAACATTTCAACCAGTTCCTCCTCATTCAGATGGATCTAAATTGTCTGCAGCCCCAAATTCATTTCATAATATGACTAAGCTACATAATTCTCCATATCCTAGCAATATCAAAAGTACTCTTATTTCTCATCAGCGAACCAGAGAAGATTCTAATCCAAGCACTACTCAATCTCCTAGTCTACATAGGTTACATGTACCCCCAGCAATCTACGACCCTTCATGTGGCCAAGCATTTCATTATGAGAATTTGAACCAGAGGCATCCTTGTGGTTCTAAACATATGCATTCTCCTTCCTTCACTGGAATTGCCAATACCATTTCTAAGAATGTTATCTTGGGAGTTCAGGGATCTCCATCACCTTCTGAGTATGAGCAAGGCCTCATCGGCGTTATCCTTCTAGCCTTAAACACTCTGAAGATTGAAAAGGTTATGCCAACTGAAGCAAATATAACTGATTGCATTTCTTATGGAGAATTCCAATATCGAACTACTGATGTCAAGAAGGCCTTAGATTGTGCAATCATGCTAAATGCGGTAGTAAAACAAAGACTAGGTGCATTACAGTTTTATGTTGGTAGAAACGAGAAACTATGGAATTGTGTAAACATTATAGGTGGTAATGTTAGTCAGTATCCAAAAACAACATGGGATCGGTTACAAGAGTTCCTTGCTTCATCATCAGGACGGTCGGCAATTCTGTCTTCCCAGTGCAGATATGAAGCATCTTTAATTCTAAGGAAAGAATGCCTTAAAGAGCTTATGTTAGGAGAGATACATCAGATCTTGAATATGATCATCACGGTCAAGAAATGGATTATAACTCATCGGTCTGGATGGCAGCCGATTTCTATTACGCTTAATGAGAGTGGAGATGATACAGGAAGTGTTCCGGAGTTAAAGTAA 1986 0.4275 MSGCVSKNDYNVVACAPEAAGSGRAEPQYASAKISVWWDIENCQVPKGCDAHAIAQNISSALVTMNYCGPVSISAYGDTSRIPSFVQKALSSTGISLNHIPTGVKDASDKKILVDMLLWAVDNPAPANYLLISGDRDFSNALHQLRLRKYNILLAQPPKASAPLVAAAKCVWLWTSLLSGGAPLSSAKLLCLASGNHVSNSGSIQNPVAEPNQISQPLFLNSENLDMGSQNTYTTRSVADLKHKVNYVLKTDNQPNLSSSSSLPVTVSGGKNNDPLKLAQSPVKLFPKAPHEFFFSSKPVVPNGRFTPNLPSNQDCSENERGNSNEIHQDAYHSSSRSNNLHIQPMSGPNLLLPVPDSHTGTFQPVPPHSDGSKLSAAPNSFHNMTKLHNSPYPSNIKSTLISHQRTREDSNPSTTQSPSLHRLHVPPAIYDPSCGQAFHYENLNQRHPCGSKHMHSPSFTGIANTISKNVILGVQGSPSPSEYEQGLIGVILLALNTLKIEKVMPTEANITDCISYGEFQYRTTDVKKALDCAIMLNAVVKQRLGALQFYVGRNEKLWNCVNIIGGNVSQYPKTTWDRLQEFLASSSGRSAILSSQCRYEASLILRKECLKELMLGEIHQILNMIITVKKWIITHRSGWQPISITLNESGDDTGSVPELK 661
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele06g0123 661 MobiDBLite consensus disorder prediction 363 422 - -
Lele06g0123 661 MobiDBLite consensus disorder prediction 297 422 - -
Lele06g0123 661 PANTHER LIMKAIN B LKAP 24 528 IPR024768 GO:0005777|GO:0010468|GO:1903231
Lele06g0123 661 CDD PIN_limkain_b1_N_like 33 157 - -
Lele06g0123 661 Gene3D - 27 176 - -
Lele06g0123 661 Pfam NYN domain 33 168 IPR021139 GO:0004540
Lele06g0123 661 MobiDBLite consensus disorder prediction 328 346 - -
Lele06g0123 661 Pfam OST-HTH Associated domain 595 649 IPR025677 -
Lele06g0123 661 MobiDBLite consensus disorder prediction 302 320 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele06g0123 Lele-ChrLele06 762341 764868 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele06g0123 25 217 C2H2 Transcription Factor Family AT5G61190 72.308 1.63e-86 290
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele06g0123 06 762341 764868 Lele06g0123 06 762341 764868 ECH
Lele05g0306 05 1738701 1740782 Lele06g0123 06 762341 764868 ECH
Lele06g0123 06 762341 764868 Lele08g0126 08 780215 782670 hybridization