Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele06g0120 ATGGAAGATGAATCTTTTCTTTCCTGGCAAACAAGGACCCAATTTGAACCCATCACCGAGCATCGAGTTCCTGATTTATCCTTCACAAGTTCTCATTCCTTCAACGAATTTTTCTCTTTGCAGGAAGCCCAGCGAGACCCACAATCCCCATCTCAATTATTGACTCAGAATGCCCCCAAGAAGAAACTTACTCGCTGCAAGACTGCCCCTGCCATGGTTGTTTTGCAAGACCTTAGAAAAAATTCGCCCGACGTTCCCAAACCGCACTCTAGCTCCATCATCAGGCAAGGCGTTTGCTTGCTCATGATATATCTTTCAGTTGGGGTTGTCATATACTCCTTCAATCGGGACCATTTTTCGGGCGCAGAGACTCACCCGGTAGTTGACGCCCTTTACTTTTGTATAGTCACCATGTGCACAATCGGTTACGGAGACATCACACCGACAACCCCAGAAACCAAGGTCTTCGCCTGTATCTTTGTATTGGTAGGGTTTGGGTTCATTGACATATTGCTTAGCGGGCTTGTTAATTACGTCCTAGATTTGCAAGAGAACACGATTCTAACTGGGCTTAAAATGGGTGCTCAAGCTCAAAGATCTCAAGAAGGGTTCTCTGCAAGAAATTACATAGTTGATGTGGCAAAGGGGCGGATGAGAATCAGATTGAAGGTTGGTTTGGCACTTGGTGTGGTGGTGTTGTGTATTGGAATAGGGAGCCTGGTTTTGTACTTTGTGGAGGACTTGGATTGGATTGATTCAATTTACTTATCGGTTATGTCTGTAACAACAGTGGGGTATGGGGATAGAGCCTTCAAGACCCTTCCTGGGAGGCTCTTTGCTGCTATTTGGCTCCTCGTTTCCACACTGATGGTGGCCCGGGCATTCCTGTATTTGGCAGAGGCCAGAATTGATAAAAGGCACCGGACAATAGCCAAGTCGGTTTTGCATAGAGATATGACTGTTGAAGATTTGCTGGCTGCCACTATCAATAACACCGGCTTCATTAGTAAGTCAGAGGGATCCATGGAAACGGCGATAAAGATCCAGTTGAGTACATTATTGTGTGTGTTGGTGAGTGTGCTTGTGACGAAGATCTCCGTTGTAGTCACGGAGAACTCTGTGTCTGCAGTGGGTGACCCTGGAATGCAGAGAGATGGACTGAGGGTTGCCTTTGAAGCTTGGAACTTTTGCAATGAAGTTGGGGAAGAAGCCCCTAACATGGGTAGCCCAAGAGCTGCTGACTGTTTCGATCTTTCAAGTTCAAGTTCTCTGAAGCACAAGGTTACAGAAGTTGATAACAGACTTGGGGTAGGGAAACCATTTCATGGTTTGGGAAGAGATATAAAAAACCCAAATCTCTATGCAGTGAAAAAGGAACAATATCTGGGTTCTATCTGTGAAGTCGCAGATACTCCAAGACCATGGCAATTTTGGATGATCATGTTGAAAAATGGAAACTACGATACAGAGTCTGGTTTATGTCCTGAGAATGGTAATAAGGTAGCCTCTTCAAGGCGTGGACGATTTCCCTGCTTTGGAAAAGGGTGTATGAACCAGCCCATCATGTGTCATCAAGAGACACGGCTACAACATGGGATCATGCGAGGAGGTTTCAATGGTACTTATGATTTGAATTCTGGTTGTGGAGGCGGCAACAGTGGCCTCTCTTACTACGAGGTTGTCTGGGAAAAGAAAGTGAATGTTGGGAGTTGGGTTTTCAAACATAAACTACAGACCTCAGAGAAATACCCATGGTTGATGCTGTACCTGAGAGCTGACGCAACCAAAGGATTCTCTGGAGGCTACCATTATGACACCAGGGGAATGCTCAAAACTCTTCCAGAGTCACCAAATTTTAAGGTGAGGGTGAGTTTAGACATCAAAAGAGGGGGAGGAGCCAAGAGCCAATTCTACCTGGTAGACATAGGAAGCTGCTGGAAGAACAATGGAGCTGCTTGTGATGGGGATGTGGTCACCGATGTAACGAGATACAGCGAGATGATCATAAACCCAGAAACTCCATCTACATGTGGCCCCAAGAGGTTAAAGAATTGCCCACCATTTCACATATCAAGAGACAAGAGAAAGATCCATAGAGATGACACTGCTAATTTTCCTTACTCGGCTTATCACTATTATTGTGCTCCCGGTAATGCCCAACACTTGAAGCAACCTGTGAGCATTTGTGATCCTTACAGCAACCCTCAGGCACAAGAAATAGTTCAGTTGCTGCCTCACCCAGTTTGGGCTGATTATGGGTATCCCACCAAAAAAGGGGATGGTTGGGTTGGGGATGCAAGAACTTGGGAGCTTGATGTTGGTGGATTGTCCAGTAACCTCTACTTCTACCAGGACCCTGGCTCTCCTCCTGCTAAGAGGGTATGGACTTCTATCGATTTGGGTACTGAGATTTATGTTAGTGAAAAAGATGAAGTAGCAGAGTGGACTCTAAGAGACTTTGACGTCCTCCTCACGAAGCCAAATTCATGA 2490 0.457 MEDESFLSWQTRTQFEPITEHRVPDLSFTSSHSFNEFFSLQEAQRDPQSPSQLLTQNAPKKKLTRCKTAPAMVVLQDLRKNSPDVPKPHSSSIIRQGVCLLMIYLSVGVVIYSFNRDHFSGAETHPVVDALYFCIVTMCTIGYGDITPTTPETKVFACIFVLVGFGFIDILLSGLVNYVLDLQENTILTGLKMGAQAQRSQEGFSARNYIVDVAKGRMRIRLKVGLALGVVVLCIGIGSLVLYFVEDLDWIDSIYLSVMSVTTVGYGDRAFKTLPGRLFAAIWLLVSTLMVARAFLYLAEARIDKRHRTIAKSVLHRDMTVEDLLAATINNTGFISKSEGSMETAIKIQLSTLLCVLVSVLVTKISVVVTENSVSAVGDPGMQRDGLRVAFEAWNFCNEVGEEAPNMGSPRAADCFDLSSSSSLKHKVTEVDNRLGVGKPFHGLGRDIKNPNLYAVKKEQYLGSICEVADTPRPWQFWMIMLKNGNYDTESGLCPENGNKVASSRRGRFPCFGKGCMNQPIMCHQETRLQHGIMRGGFNGTYDLNSGCGGGNSGLSYYEVVWEKKVNVGSWVFKHKLQTSEKYPWLMLYLRADATKGFSGGYHYDTRGMLKTLPESPNFKVRVSLDIKRGGGAKSQFYLVDIGSCWKNNGAACDGDVVTDVTRYSEMIINPETPSTCGPKRLKNCPPFHISRDKRKIHRDDTANFPYSAYHYYCAPGNAQHLKQPVSICDPYSNPQAQEIVQLLPHPVWADYGYPTKKGDGWVGDARTWELDVGGLSSNLYFYQDPGSPPAKRVWTSIDLGTEIYVSEKDEVAEWTLRDFDVLLTKPNS 829
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele06g0120 829 Pfam Ion channel 232 299 IPR013099 -
Lele06g0120 829 Pfam Ion channel 101 179 IPR013099 -
Lele06g0120 829 SUPERFAMILY Voltage-gated potassium channels 91 183 - -
Lele06g0120 829 SUPERFAMILY Voltage-gated potassium channels 215 324 - -
Lele06g0120 829 Gene3D - 207 323 - -
Lele06g0120 829 Gene3D - 73 206 - -
Lele06g0120 829 PRINTS Two pore domain K+ channel signature 136 164 IPR003280 GO:0005267|GO:0016020|GO:0071805
Lele06g0120 829 PRINTS Two pore domain K+ channel signature 262 271 IPR003280 GO:0005267|GO:0016020|GO:0071805
Lele06g0120 829 FunFam Two-pore potassium channel 5 82 192 - -
Lele06g0120 829 PANTHER - 353 826 - -
Lele06g0120 829 FunFam Two-pore potassium channel 3 207 321 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele06g0120 Lele-ChrLele06 747290 752630 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele06g0120 4 339 Ion Channels AT4G01840 58.630 4.03e-131 395