Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele06g0118 ATGCTTGCCCTACAAGCAAACACAAGTGGCAAATCGTTTATAAAATTGGTGGGAACAAATCTACCGAATCACCAGCACCAGATTGACGGTACAAGGCAGAGATCTGATATGGGGACCGAGAACGGCCAAGACGAAGCAAGCACGTCAAAGAATGAAGCAGGAACAAGCTCAAATGAAGAAAATAGCAATCAAACAGAGAAGGCCGAGACAGTTCCGTTTCATAAGTTGTTCACATTCGCCAACTCTACAGATATATTGTTGATGGTTGTTGGCAGCATCGGGGCCATCGGAAATGGTGCGGGTTTGCCTCTCATGACGTTGCTGTTCGGCGAGATGATTGACTCCTTCGGAAATAACCAGTACAGCGCTGACGTGGTCGATAAAATTTCCAAGGTTTCTCTGAAGTTTGTGTACTTGGCGGTAGGAGCTGGAGTGGCAGCTTTTCTCCAGGTGGCTTGCTGGATGGTCACAGGGGAGAGACAGGCCGCGAGAATAAGGAGTTTGTATTTGAAAACAATACTGAGACAAGATGTCGCTTTCTTCGATAAGGAAACAAACACAGGAGAGGTGGTGGGTAGAATGTCAGGTGACACTGTTCTCATACAAGACGCCATGGGTGAAAAGGTTGGAAAATTTCTGCAGCTAATATCAACATTCGTTTCGGGTTACATAGTAGCATTTTTGAAAGGTTGGCTTCTCAGTCTTGTCATGTTATCCACTCTTCCACTTCTTGTGGTGTCTGGTGCGGCTATGGCCTTCATTATAGGCAGGATGGCATCGCAAGGCCAAACTGCTTATGGAAAAGCTGCAAACATCGTTGAACAGACAATTGGCGCAATTAGAACGGTTGCATCCTTCACGGGAGAGAAGCACGCAGTATCTGGTTACAGCAGGTTTCTTGTAGATGCATACAGAGCAGGAGTTCAGGAAGGTTTGGTAGCAGGAGCGGGTATTGGGACAGTTATGTTCGTTATTTTCTGTGGCTATGCTTTGGCCACATGGTATGGTGCAAAGTTGATACTGGATAAAGGATATAACGGGGGTGATGTGATTACTGTGATCTTTTCCGTCTTAACTTCTTCCATGAATCTTGGTCAAGCAGCCCCTTGTTTGAGTGCTTTTGCGGCAGGCCAAGCTGCAGCTTATAAAATGTTCAAGACCATTGAGAGAAAACCAGAGATAGATTCTTATGATGAAAAAGGGAAAATATTAGAAGATGTTCAAGGGGAAATAGAGTTGAGGGAAGTTTATTTCAGTTACCCAGCTAGACCTGGGGAGCTGATTTTTGATGGCTTCTCTCTTAAAATACCAAGTGGCACTACTGCAGCTTTGGTTGGACAAAGTGGAAGTGGAAAGTCCACTGTCATCAGTTTAATAGAAAGATTTTATGATCCACGGGCAGGTGAAGTTCTTATAGATGGCATTAACTTGAAAGAATTTCAACTCAGATGGATTAGAGGAAAAATTGGGCTTGTCAGCCAAGAGCCTGTCCTTTTTGCATCTAACATTAAGGATAACATTGCCTATGGAAAGGATGGAGCAACAACTGAAGAGATAAAAGCTGCAGCTGAACTTGCAAATGCAGCTAAATTCATTGATAAATTACCACAGGGATTGGACACAATGGTTGGTGATCATGGAACTCAGTTGTCTGGGGGGCAGAAGCAGCGCATTGCCATTGCAAGAGCAATCCTCAAAAATCCAAAAATCCTACTTCTAGATGAAGCTACGAGTGCACTTGATGCAGAGTCTGAAAGGATTGTGCAAGAGGCTCTAGACAGGATCATGGTAAACAGAACTACCGTTGTTGTGGCACACCGCTTAAGCACAGTGAAAAATGCAGATATGATTGCTGTGATTCACAGGGGGAAAATGGTCGAGAAAGGAAAACACACAGAATTACTTAAGGATCCTGAAGGAGCATACTCTCAGCTTATACGCTTACAAGAAGTAAATAAGGAGTCAGGAGATAGTGTAGATGATGAAAACAAGCATGAACTTTCCTCAGAATCCTTAAGGCATTCTAGTCAGATAAGGTCATTAGGAAGATCCATAAGTCGAGGATCATCGGTGGGGAATAGCAGCCGCCACTCATTTTCAGTTGCGTTTGGCTTGCCTACTGCAGTCAACACCACTGATCCCGAACTTGAAAATCCAGAAACTAAAGAACAGTCACCAAAGGTTCCACTCCGCCGCCTTGCTTCCCTCAACAAGCCAGAGATCCCGGTGCTTCTGATTGGATCATTAGCTGCCATTGTGAATGGTGCCGTACTTCCTACGTTTGGCATTTTGATTTCCAGTGCAATCAAATCGTTCTATGAGCCACCTGATGAAATGAAAAAGGATTCCAAGTTCTGGGCATTAATGTTTCTGATACTTGGTGTTGTGTCTTTCGTGGCACTTCCTGCTCGAGGATACCTTTTTGCCGTTGCCGGATGTAAGTTAATTCAACGCATCAGGCTGATGTGTTTTGAGAAGGTAGTAAGCATGGAGATAGGATGGTTTGATGATCCTGAGCATTCGAGTGGTGTAATTGGAGCAAGGCTTTCAGGAGACGCAGCCACTGTGCGTGCACTTGTTGGGGATGCTCTTGGACAATTGGTCGAGAATCTCGCATCATTACTGGCGGGTTTGATAATTGCTTTCCTCGCAAGCTGGCAGTTAGCTTTTATTATTCTTGTATTGATTCCCCTGATTGGAGTAAACGGATACGTTCAAGTGAAATTCATGAAAGGGTTCAGTGCAGATGCAAAGATGATGTACGAGGAAGCAAGTCAAGTTGCTACCGATGCAGTTGGAAGTATAAGAACAGTAGCTTCTTTTTGTGCTGAAGAAAAGGTGATGGAACTATACAGAAAGAAATGTGAAGGGCCTATGAAATCAGGGATACATCAGGGCTTGATCAGCGGAACAGGATTTGGAGTATCGTTTTTCCTACTCTTCTCCGTCTACGCAACCAGCTTTTACGCGGGAGCTAGACTTGTGGAGGACGGCAAAGCGACATTCCCAGAGGTTTTTCGGGTTTTCTTTGCTTTAACCATGGCAGCTTTAGCAGTTTCCCAGTCAAGCTCTTTTGCGCCTGATTCTAGCAAAGCCAAGTCAGCCGCTGCTTCTATATTTGGAATAATTGACAGGAAATCGGAGATAGATCCCAGCGACGAGTCAGGAGCCACATTGGATAGCGTGAAGGGAGAAATTGAGCTTCGTCACGTTAGCTTCAAGTATCCGTCAAGGCCAGATATACAGATTTTCCGAGACCTTAGCTTGGCCATACATTCTGGAAAGACGGTGGCCCTTGTAGGTGAAAGTGGAAGTGGAAAATCTACGGTGATTTCATTATTGCAAAGATTTTACGATCCTGATTCGGGTTCAATTACACTTGATGGAATAGAGATTCAAAAGTTGCAACTCAAATGGTTAAGGCAACAAATGGGTCTTGTGAGCCAGGAGCCAATATTGTTCAATGACACTATTCGTGCCAATGTTGCCTATGGAAAGGGAGGCGATGCAACAGAAGGAGAAATCATAGCTGCAACCGAGCTGGCCAATGCTCACAAGTTCATTAGCGGCTTACAACAAGGGTATGATACAGTAGTGGGAGAAAGGGGAATTCAATTGTCAGGTGGGCAAAAGCAAAGAGTAGCAATTGCACGGGCTATAATTAAGAGTCCAAAGATTTTGTTATTAGACGAAGCAACGAGTGCTTTGGACGCAGAGTCAGAGAGGGTGGTTCAAGATGCATTGGATAGAGTGATGGTGAATAGAACTACCGTGGTTGTGGCGCATCGTTTATCTACAATAAAAAATGCAGATGTTATTGCGGTGGTTAAAAACGGAGTCATAGTTGAGAAAGGAAGGCACGAGACCTTGATTAACATCAAGGATGGATTCTATGCTTCTTTAGTCCAACTTCACGCGAGCGCTTCTACATCATGA 3936 0.4433 MLALQANTSGKSFIKLVGTNLPNHQHQIDGTRQRSDMGTENGQDEASTSKNEAGTSSNEENSNQTEKAETVPFHKLFTFANSTDILLMVVGSIGAIGNGAGLPLMTLLFGEMIDSFGNNQYSADVVDKISKVSLKFVYLAVGAGVAAFLQVACWMVTGERQAARIRSLYLKTILRQDVAFFDKETNTGEVVGRMSGDTVLIQDAMGEKVGKFLQLISTFVSGYIVAFLKGWLLSLVMLSTLPLLVVSGAAMAFIIGRMASQGQTAYGKAANIVEQTIGAIRTVASFTGEKHAVSGYSRFLVDAYRAGVQEGLVAGAGIGTVMFVIFCGYALATWYGAKLILDKGYNGGDVITVIFSVLTSSMNLGQAAPCLSAFAAGQAAAYKMFKTIERKPEIDSYDEKGKILEDVQGEIELREVYFSYPARPGELIFDGFSLKIPSGTTAALVGQSGSGKSTVISLIERFYDPRAGEVLIDGINLKEFQLRWIRGKIGLVSQEPVLFASNIKDNIAYGKDGATTEEIKAAAELANAAKFIDKLPQGLDTMVGDHGTQLSGGQKQRIAIARAILKNPKILLLDEATSALDAESERIVQEALDRIMVNRTTVVVAHRLSTVKNADMIAVIHRGKMVEKGKHTELLKDPEGAYSQLIRLQEVNKESGDSVDDENKHELSSESLRHSSQIRSLGRSISRGSSVGNSSRHSFSVAFGLPTAVNTTDPELENPETKEQSPKVPLRRLASLNKPEIPVLLIGSLAAIVNGAVLPTFGILISSAIKSFYEPPDEMKKDSKFWALMFLILGVVSFVALPARGYLFAVAGCKLIQRIRLMCFEKVVSMEIGWFDDPEHSSGVIGARLSGDAATVRALVGDALGQLVENLASLLAGLIIAFLASWQLAFIILVLIPLIGVNGYVQVKFMKGFSADAKMMYEEASQVATDAVGSIRTVASFCAEEKVMELYRKKCEGPMKSGIHQGLISGTGFGVSFFLLFSVYATSFYAGARLVEDGKATFPEVFRVFFALTMAALAVSQSSSFAPDSSKAKSAAASIFGIIDRKSEIDPSDESGATLDSVKGEIELRHVSFKYPSRPDIQIFRDLSLAIHSGKTVALVGESGSGKSTVISLLQRFYDPDSGSITLDGIEIQKLQLKWLRQQMGLVSQEPILFNDTIRANVAYGKGGDATEGEIIAATELANAHKFISGLQQGYDTVVGERGIQLSGGQKQRVAIARAIIKSPKILLLDEATSALDAESERVVQDALDRVMVNRTTVVVAHRLSTIKNADVIAVVKNGVIVEKGRHETLINIKDGFYASLVQLHASASTS 1311
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele06g0118 1311 CDD ABC_6TM_Pgp_ABCB1_D2_like 734 1049 - -
Lele06g0118 1311 Gene3D ABC transporter type 1, transmembrane domain 134 1040 IPR036640 GO:0005524|GO:0016020
Lele06g0118 1311 FunFam ABC transporter B family member 9 1033 1055 - -
Lele06g0118 1311 MobiDBLite consensus disorder prediction 653 672 - -
Lele06g0118 1311 SMART AAA_5 438 610 IPR003593 -
Lele06g0118 1311 SMART AAA_5 1093 1286 IPR003593 -
Lele06g0118 1311 MobiDBLite consensus disorder prediction 673 694 - -
Lele06g0118 1311 CDD ABC_MTABC3_MDL1_MDL2 1066 1304 - -
Lele06g0118 1311 FunFam ABC transporter B family member 1 401 650 - -
Lele06g0118 1311 Gene3D - 1056 1310 IPR027417 -
Lele06g0118 1311 ProSitePatterns ABC transporters family signature. 550 564 IPR017871 GO:0005524|GO:0016887
Lele06g0118 1311 CDD ABC_MTABC3_MDL1_MDL2 411 649 - -
Lele06g0118 1311 PANTHER ABC TRANSPORTER B FAMILY 51 652 - -
Lele06g0118 1311 FunFam ABC transporter B family member 1 1056 1306 - -
Lele06g0118 1311 FunFam ABC transporter B family member 1 724 1032 - -
Lele06g0118 1311 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 411 647 IPR003439 GO:0005524
Lele06g0118 1311 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1057 1304 IPR027417 -
Lele06g0118 1311 Pfam ABC transporter transmembrane region 744 1016 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Lele06g0118 1311 Pfam ABC transporter transmembrane region 91 362 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Lele06g0118 1311 Pfam ABC transporter 1085 1234 IPR003439 GO:0005524
Lele06g0118 1311 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 89 376 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Lele06g0118 1311 MobiDBLite consensus disorder prediction 23 67 - -
Lele06g0118 1311 SUPERFAMILY ABC transporter transmembrane region 75 395 IPR036640 GO:0005524|GO:0016020
Lele06g0118 1311 MobiDBLite consensus disorder prediction 652 694 - -
Lele06g0118 1311 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 745 1031 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Lele06g0118 1311 FunFam ABC transporter B family member 9 75 408 - -
Lele06g0118 1311 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 1066 1303 IPR003439 GO:0005524
Lele06g0118 1311 CDD ABC_6TM_Pgp_ABCB1_D1_like 88 372 - -
Lele06g0118 1311 Gene3D - 409 666 IPR027417 -
Lele06g0118 1311 SUPERFAMILY ABC transporter transmembrane region 726 1051 IPR036640 GO:0005524|GO:0016020
Lele06g0118 1311 Pfam ABC transporter 430 578 IPR003439 GO:0005524
Lele06g0118 1311 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 401 649 IPR027417 -
Lele06g0118 1311 ProSitePatterns ABC transporters family signature. 1206 1220 IPR017871 GO:0005524|GO:0016887
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele06g0118 Lele-ChrLele06 731475 737263 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele06g0118 64 1305 Calmodulin-binding Proteins AT2G36910 45.012 0.0 1061