Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele06g0108 ATGTGTTTGCACCCTATTGCGGTGTACTGGGAGTATTCAGTAAATACGGCATCCTCTTTCTTCTTCATCTTCTCAACCTCGTTACTCTGCCATCCCTACTCTGCATCCTTGGGAGCCGAGGCTCGTCGTGATCCCTCTTCCATTTCATCTCTCATAAGCAAACAGCTATTTACAACCATCTTCCTCCACAAAGATGACTCCGCATGCCCTGCCAAGGACTTCTACACCTGCAAGTCCTTCATTCAGGCAGCCAAAAGCTTCCCTGAATTGGGCACCGCCGGAAATATAAGCACACGAAAGCGAACTTTAAATGGGCCAGCAGGGAAGGCTTTGGGATACGATGGGTTGATGAATCCTGAGATCATATCCAACAATCCTGTGATTGCGTTTAAGACGGCTCTGTGA 405 0.4815 MCLHPIAVYWEYSVNTASSFFFIFSTSLLCHPYSASLGAEARRDPSSISSLISKQLFTTIFLHKDDSACPAKDFYTCKSFIQAAKSFPELGTAGNISTRKRTLNGPAGKALGYDGLMNPEIISNNPVIAFKTAL 134
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele06g0108 134 SUPERFAMILY Lysozyme-like 47 134 IPR023346 -
Lele06g0108 134 Pfam Chitinase class I 51 103 IPR000726 GO:0004568|GO:0006032|GO:0016998
Lele06g0108 134 PANTHER CHITINASE-RELATED 26 103 - -
Lele06g0108 134 Gene3D - 46 134 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele06g0108 Lele-ChrLele06 673505 674928 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele06g0108 105 134 Glycoside Hydrolase AT4G01700 70.000 7.89e-09 50.4
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele06g0108 06 673505 674928 Lele14g2101 14 26639379 26640302 CCT
Lele06g0108 06 673505 674928 Lele16g0256 16 1420123 1421014 CCT
Lele06g0108 06 673505 674928 Lele07g0311 07 1713794 1716951 hybridization
Lele06g0108 06 673505 674928 Lele08g0110 08 660820 664631 hybridization