Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele06g0105 ATGGGGAGGCACTCTTGCTGCTACAAGCAAAAGCTTCGCAAAGGCCTCTGGTCCCCGGAGGAGGACGAGAAACTCCTCCGCCATATCACTAAGTATGGCCATGGCTGCTGGAGCTCTGTTCCTAAGCAAGCAGCTCAGCTGCCAGGAAGAACGGACAATGAAATAAAGAATCTGTGGAACTCATGCCTCAAGAAGAAGCTGAGGCAAAGAGGGATAGACCCTGTGACCCATAAACCACTGTCGGAAGTCGAGAATGGAGATCAAGAGAAAGTTACAACGGTTAGTTCCAATGAATTGAACCTCCTGAAATCAGAAAGCTCAAAGTCCGATGGAGCTTCCTATGAGCATAAACCATGTTCGAGTATTGCCCGTAAAGCCTATGCACAAGACATGGAGGGTTCTTCTTCCACCTCCAAAATGAACACCAGAAACAACACCAATTGCAATTTCATCCCCGATTGTTGCAGTAAAGAATTGTTCCTGGACAACAACAGGTTCATCGCCAGCAGCAGTCACCAGGAAAGCTATACCACTTCAGATTTCATGACGAATTTCCCTCTTCACATGAACTATAATAACAATCCATTCGCTACTCAAACCGGAGGAATTAGACCATTTGATATCAATACTGAATTCACCTCCAGTGCCATGTCCACTGTATTCCCACTTTCTTCAACCTCCTCATTTCTCCCGACTTCTGTCTGCTACAAGCCTTCTCTCCCATCAGTTCCATCTGATGATATCTCCACAGGTTCCTTCTCCATGAACGAATCCCAGTACTGGGAAGCCCCTGCTTTGAACAATCACAGCAATAGAGACAGCCACTCGAACTTGCACAACAGTATTGTTTCTTGGGGATTGACAGATTTTGGCGGAACTGGTAAAGAAACTCATCATCAGATTAATATGATGGAGAGTCAGACAGAAGAAGCAAGGTGGCCTGAGTACCTTCATAGTAACCCAATCTTAATGCTGGCTCCAGAATCCTTATGCAACGATATAAAGCCAGCCTCACATTTGGTACCCGATGCTTTAGGAGCTATTTTGCCTCATCATCACAAGCAGCAAGATCATCATCATCAAGCTTTACAAACTTCTGCAATATTCTCAAAGGACATCCAGAAGCTCACCGCAGCTTTCGGACATATATAG 1152 0.4531 MGRHSCCYKQKLRKGLWSPEEDEKLLRHITKYGHGCWSSVPKQAAQLPGRTDNEIKNLWNSCLKKKLRQRGIDPVTHKPLSEVENGDQEKVTTVSSNELNLLKSESSKSDGASYEHKPCSSIARKAYAQDMEGSSSTSKMNTRNNTNCNFIPDCCSKELFLDNNRFIASSSHQESYTTSDFMTNFPLHMNYNNNPFATQTGGIRPFDINTEFTSSAMSTVFPLSSTSSFLPTSVCYKPSLPSVPSDDISTGSFSMNESQYWEAPALNNHSNRDSHSNLHNSIVSWGLTDFGGTGKETHHQINMMESQTEEARWPEYLHSNPILMLAPESLCNDIKPASHLVPDALGAILPHHHKQQDHHHQALQTSAIFSKDIQKLTAAFGHI 383
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele06g0105 383 SUPERFAMILY Homeodomain-like 7 73 IPR009057 -
Lele06g0105 383 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 67 IPR017930 -
Lele06g0105 383 SMART sant 13 65 IPR001005 -
Lele06g0105 383 Gene3D - 11 69 - -
Lele06g0105 383 ProSiteProfiles Myb-like domain profile. 9 63 IPR001005 -
Lele06g0105 383 PANTHER MYB DOMAIN PROTEIN 55 1 44 - -
Lele06g0105 383 CDD SANT 17 60 IPR001005 -
Lele06g0105 383 Pfam Myb-like DNA-binding domain 14 62 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele06g0105 Lele-ChrLele06 645058 646543 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele06g0105 1 102 MYB Transcription Factor Family AT4G01680 54.967 9.31e-47 158
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Lele06g0105 Myb_DNA-binding 3.2e-11 CL0123