Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele06g0084 ATGTACATACTAGCAAGTCATCACTACCTGGTCAAATACTACAATCCAATGTATAGAAAGATTGCTACAGCACAGTCATCCCTAAGCTCCGAGTCTCCGGCAGTCTTAGCCCCGGCGTTCGATAACGCAGGCCTACTGCATTCCTCCTCTCTCATACTGTTGCAGTTCTCTGCCCTTCTTTCAGGTTCTCTAAATCAATCCAGATTTGAAGGCCTAGTTGCTACGCCTCCACCCAGGGCTTATATACATACATATGAATGGCGTGGAGAGAGCTTGGAAGAAAGTGTCCTAATTATCACTCAAATGCAGAGAATATATATGAACTTTGCCAGAGCTTTGACTGCAGTGCCATCTAGGCATTTGGCACGGTCATGTTCTTCATCTACATTTGCAGCAAAATCTGTTTATGCATCAGCAGGATGCTTGACTGAATTTATCAGTCACTCATCTGCCGGAGCGGCTGGTTTTTGTAATGGAACAAAAGAACATGGAATACGATACCGGCGGTTCCATGCTAATCCAGAAGTATGGACCAGAAGAAATGAGGAGTTATTTGGTTTGAAGACTCCAAAGAAGGAGAAGCGTGTGAGAAGGGACAGTAAAAATCAACCCCCTGTTGAAACTCCATATGTTCCTCGTAATGTGGTCAAATCTACCAAATCCATTCTTGATAAAACAATTGAAATATTTGAAGGCATGACTATTGCTGAGCTGGCAAAGCGTACTGGAAAGTCAGCATCCTCTCTGCAAGATACTCTAGTAAATGTTGGGGAAAAGGTTGAATCAGATTTTGAGCCTCTCAGCGTTGATATTGCAGAACTTGTTGCAATGGAAGTGGGTGTCAATGTCAAGAGGCTACATTCTACTGAAGGCGCAGAGATTGCACCCCGGCCTGCAGTTGTAACAGTGATGGGTCATGTTGACCATGGTAAAACCTCCCTTCTTGATTCTTTGCGCCAAACATCAGTGGCAGCCAAGGAGGCTGGGGGTATAACTCAGCATCTAGGTGCCTTTGTGGTGGCCATGCCATCAGGAGCATCAATCACATTTCTGGACACCCCTGGTCATGCTGCATTTAGTGCAATGCGGGCAAGAGGTGCAGCGGTTACAGATGTGGTGGTACTTGTTGTTGCTGCAGATGATGGTGTGATGCCTCAAACACTTGAAGCTATATCCCATGCAAAAGCAGCTAATGTACCGATAGTAGTTGCAATAAATAAATGTGATAAACCAGGAGCAAGTCCTGAAAGAGTAAAACTTCAGCTTGCATCAGAGGGCTTGTTGCTGGAAGAGATGGGTGGTGATGTTCAGGTGGTTGAAGTTTCTGCGACTATGAAAACTGGACTGGATAACTTGGAGGAAGCTTTGCTCCTTCAAGCTGAAATGATGGATCTAAAAGCTCGAATTGATGGCCCTGCTCAAGCTTATGTGGTAGAAGCAAGGCTTGATAAAGGACGAGGCCCATTAGTTACTGCCATTGTGAAGGCAGGGACTCTTGTTTGTGGTCAGTATGTGGTTATAGGCTCAGAATGGGGCAAAATAAGGGCTATTAGAGAAGTGACGGTTAAGCTGACTGACAGAGCAACACCCGCAATGCCTGTTGAGATTGAAGGGCTTCGGGGGACTCCAATGGCTGGTGATGATGTTATTGTTGTTCAATCAGAGGAGCGAGCACGATTGCTTAGTGTTGGTAGGAAAAGGAAATATGAGGAGGATAGGCTTTAG 1725 0.4533 MYILASHHYLVKYYNPMYRKIATAQSSLSSESPAVLAPAFDNAGLLHSSSLILLQFSALLSGSLNQSRFEGLVATPPPRAYIHTYEWRGESLEESVLIITQMQRIYMNFARALTAVPSRHLARSCSSSTFAAKSVYASAGCLTEFISHSSAGAAGFCNGTKEHGIRYRRFHANPEVWTRRNEELFGLKTPKKEKRVRRDSKNQPPVETPYVPRNVVKSTKSILDKTIEIFEGMTIAELAKRTGKSASSLQDTLVNVGEKVESDFEPLSVDIAELVAMEVGVNVKRLHSTEGAEIAPRPAVVTVMGHVDHGKTSLLDSLRQTSVAAKEAGGITQHLGAFVVAMPSGASITFLDTPGHAAFSAMRARGAAVTDVVVLVVAADDGVMPQTLEAISHAKAANVPIVVAINKCDKPGASPERVKLQLASEGLLLEEMGGDVQVVEVSATMKTGLDNLEEALLLQAEMMDLKARIDGPAQAYVVEARLDKGRGPLVTAIVKAGTLVCGQYVVIGSEWGKIRAIREVTVKLTDRATPAMPVEIEGLRGTPMAGDDVIVVQSEERARLLSVGRKRKYEEDRL 574
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele06g0084 574 MobiDBLite consensus disorder prediction 191 211 - -
Lele06g0084 574 Pfam Elongation factor Tu GTP binding domain 301 457 IPR000795 GO:0003924|GO:0005525
Lele06g0084 574 Gene3D Translation factors 469 574 - -
Lele06g0084 574 ProSiteProfiles Translational (tr)-type guanine nucleotide-binding (G) domain profile. 296 466 IPR000795 GO:0003924|GO:0005525
Lele06g0084 574 Gene3D - 293 468 IPR027417 -
Lele06g0084 574 PANTHER TRANSLATION INITIATION FACTOR IF-2-RELATED 189 574 IPR015760 -
Lele06g0084 574 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 297 487 IPR027417 -
Lele06g0084 574 CDD IF2_eIF5B 300 463 - -
Lele06g0084 574 TIGRFAM small_GTP: small GTP-binding protein domain 299 451 IPR005225 GO:0005525
Lele06g0084 574 CDD IF2_mtIF2_II 472 567 IPR044145 -
Lele06g0084 574 SUPERFAMILY Translation proteins 470 552 IPR009000 -
Lele06g0084 574 FunFam Translation initiation factor IF-2 293 468 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele06g0084 Lele-ChrLele06 531714 536311 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele06g0084 297 518 Eukaryotic Initiation Factors Gene Family AT1G21160 31.985 3.35e-24 105
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele06g0084 06 531714 536311 Lele07g0282 07 1542204 1545745 hybridization
Lele06g0084 06 531714 536311 Lele08g0086 08 506818 511218 hybridization