Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele06g0074 ATGGGACGACACTCTTGCTGTTACAAGCAGAAACTCAGGAAGGGCCTCTGGTCTCCGGAGGAAGACGAGAAGCTTCTCAATTACATCACCAAGCATGGCCATGGATGTTGGAGCTCCGTCCCCAAACTTGCCGGTACTAACCCTCTCTTGTCTCATTCATTGATTTCTGTTGTTTCCTTAGTGAAGGCCATGAATCATTCTAAGCTTTTCTCCTTTCTCCGTGGCACAGGCTTGCAGAGGTGTGGCAAGAGCTGCAGGTTGAGGTGGATAAATTACCTGAGGCCTGATTTGAAAAGAGGAGCATTCTCGCAGCAGGAAGAGGAATTGATAATTGAACTCCATGCAGTCCTCGGCAACAGGTGGTCACAGATTGCAGCTCAGTTACCAGGAAGAACTGACAATGAGATTAAGAACCTGTGGAATTCGTGCCTCAAGAAGAAGCTCAGGCAAAGAGGCATTGACCCCAACACCCACAAGCCACTCTCTGAGGTTGAGAACAAGGACAAGCCCCCCTCAGCCGACAAAAGCCATCACAAAGAACTGAGTGTAGCAGAGCCTGCAAAACCAAAGCCAAACGCAATGCCACATGAAGTTCCTCCTGCCTCCAAGATCAGCAATTTGACCAGCAGCCGACCCACCCAGGATTTGTTCCTTGATAGCTCCATTACCAGTTGTGGTCCTTCTGATATGATGGGTTACTTCTCTTTTCAGCACTTGAACTATCCACCCCATGTTGGTCTCTCCGCAAATCCCAACGCCTCCCTTTGCTTCATGTCAGGTTCCAGTTCCTCTCAGGTGATGTCAGACCTCAATTCTAGTATGACTCCCGCCATGCTCAATTCTCTGCCAAGCTCAATTTTCCCGACAACAAATGTAAGTACCACTGTTAGTCTCCAGTCTGATAATCCTTCCATATCCTCTGGTGATATTGATGGGGTTCAGAACTGGGAAGCTAGTGTCCTTGCTAACATCGCAAGCAAAAGCAATGGGCGCAGTGGGAGTATCCAATTGCAAAGCAGCAGCAACTTCCTTGAGAACAACAGTTTAGCATGGGGATTGACAGACTCTGTTAAGACTGATAAAGATGTTCAAGTACCCCTACAAGCAGAACAAGAAGACGTTAAATGGTCTGAGTATCTAAACACACCATTTTTTCTAGGAAACGCAGCACAGAATCAAAACTGTCAATCTATTTACAGTGAGGTTAAACCAGAGACAGGCTTCATAACTGATGAATCAAGTACCAACTGGCACCACACCCAGCATCCGTCCGTTTTCCAAACTTCAGACATCTACGCCAAGGATCTGCAAAGATTCTCAGTGGCTTTTGGACAAACCCTGTAG 1344 0.471 MGRHSCCYKQKLRKGLWSPEEDEKLLNYITKHGHGCWSSVPKLAGTNPLLSHSLISVVSLVKAMNHSKLFSFLRGTGLQRCGKSCRLRWINYLRPDLKRGAFSQQEEELIIELHAVLGNRWSQIAAQLPGRTDNEIKNLWNSCLKKKLRQRGIDPNTHKPLSEVENKDKPPSADKSHHKELSVAEPAKPKPNAMPHEVPPASKISNLTSSRPTQDLFLDSSITSCGPSDMMGYFSFQHLNYPPHVGLSANPNASLCFMSGSSSSQVMSDLNSSMTPAMLNSLPSSIFPTTNVSTTVSLQSDNPSISSGDIDGVQNWEASVLANIASKSNGRSGSIQLQSSSNFLENNSLAWGLTDSVKTDKDVQVPLQAEQEDVKWSEYLNTPFFLGNAAQNQNCQSIYSEVKPETGFITDESSTNWHHTQHPSVFQTSDIYAKDLQRFSVAFGQTL 447
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele06g0074 447 FunFam MYB transcription factor 100 172 - -
Lele06g0074 447 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 46 IPR017930 -
Lele06g0074 447 CDD SANT 17 93 IPR001005 -
Lele06g0074 447 SUPERFAMILY Homeodomain-like 79 153 IPR009057 -
Lele06g0074 447 Gene3D - 11 99 - -
Lele06g0074 447 Pfam Myb-like DNA-binding domain 99 143 IPR001005 -
Lele06g0074 447 Pfam Myb-like DNA-binding domain 14 93 IPR001005 -
Lele06g0074 447 MobiDBLite consensus disorder prediction 151 209 - -
Lele06g0074 447 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 94 148 IPR017930 -
Lele06g0074 447 CDD SANT 101 141 IPR001005 -
Lele06g0074 447 SUPERFAMILY Homeodomain-like 7 43 IPR009057 -
Lele06g0074 447 ProSiteProfiles Myb-like domain profile. 94 144 IPR001005 -
Lele06g0074 447 Gene3D - 100 178 - -
Lele06g0074 447 MobiDBLite consensus disorder prediction 151 185 - -
Lele06g0074 447 ProSiteProfiles Myb-like domain profile. 9 93 IPR001005 -
Lele06g0074 447 SMART sant 13 95 IPR001005 -
Lele06g0074 447 SMART sant 98 146 IPR001005 -
Lele06g0074 447 PANTHER MYB DOMAIN PROTEIN 55 1 341 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele06g0074 Lele-ChrLele06 485686 487131 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele06g0074 1 447 MYB Transcription Factor Family AT1G09540 45.435 1.75e-115 341
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Lele06g0074 Myb_DNA-binding 3.7e-11 CL0123