Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele06g0073 ATGATTCGGTGGAGAGAACAGGAGGACACATTACAGCGATGGAGACATAAAAGCGCACAGTCCACTGGTGGTGCTGCCGCTAAAGACGGCTACCCCTATAGAGTGAAAGATAGAACTTCTGCTCAGGACCAGCTCGAGGCTCTCCAAGTCGCGTGTTCTCCAGTGCTTTCGAGAATTCCACCGTATTCTTCCCCCCTTTCGTATCTAAGTCGACTTCTTCACCTCTTTCAAACTCATCGACGCCATGGCCTCCAGTGCCTCTTTTCTTTCCCAGGAAAATCATTCATCATGCCTCTTTACGAGTTATACAGAATGACTAAAGCGAAGTTTGATTCTAAAGAGAAAGACAACACATGTGCAACCGATCAATCTTCCGCACCGGAGAATGACTTTTTTGAGCTGGTTTGGGAAAATGGTCAGATTTCGATGCAGGGTAAGTCGAGCAGAGCAAGAAAGAGCCCAGTACATAAGAGTCTTCCATCTCACAGCTTACCATCTTACAGTCCAAGGACTGGAGATAAAGATGTAGGATTTGGTATCGATACAAAGATGGGTAAGTTAGGGGATTTAGACTCTGGATTGCATGAAATTCCAATATCTGTTCCTTCGCATGAAATGAATTTGAGCCAAGATGAAGACATGATACCTTGGTTGAATTATCCAATGGACGATTCTTTGCAAAATGAATATAGTTTTGATTTCCCGCGTGATGTATCTGGGGTCACCGTAAACGAGTTCCCAGCTGCCTCAAATAATTTTGCTCTAATGGATACAAGAAGTAACGGCAATCAGATATGTAAGGACTCTCACAAAAGTCCTGTGCCTGGTGTTTCAAGTTCAGAACAAGTAAATCTTACTAAGGGATCTTCAAATGGAGAAGTTGGGACTAGTAGGCTGAAAGGAAACAACAACCAGTTATACCCACCATCATCGCAGCGATGTCAAACATCATTTGCATCTATTAGCGCCAAAATATCAGATATCACTGAAAATAATACAAGTAATTCAATACTGCAAGCACCTTGCGGGGAAATCACTCAGATTCCATCTGCCTCTAGTGATTTTTGTAGCCTAAATATGCAGAAACAAGATCCTTTGTGTCCTAGGAATAGTTCTAACATGATGAATTTCTCCCATTTTGCAAGACCTGCTGCCATTGTGAGAGCTAATCTTCAGAGCATCAGTATGATGTCTGGTTTGTCTTCAGCAAGACCAGAAAGCTTGGGAACTAGGAAAAAAGATGTTAATGCAAGTAGCAGCAACCCTCCTGAATCAACACTCGTTGATTTGAATAATCAAAAGAACTGCCAAAAGCTGGTCATAGACCCATCAAAGGCTGAATTGGAATCAGCCAATGTGAAATCTCTCGGACAGACGGCAGATTTTGCAGAGCAGTTTGACCCTTCTTGCAAAGAGGACGGTGCATTTAAGAATGATCAAGTTTCCAATCAAGTTCCCGCGGAAAGTGGCACCAAAGGACGACCAGTTGTTGAAAAAAGCATTAATCCTGAAGTAGCCTCTTCCTCCATTTGCTCAGGAAATGGTATGAAGAGAGGTTCAGATAATGCAAATAAGAATTTGAAGCGAAGAAGTCAAGATACTGAGGACTCTGAGTGTCAAAGTGAACAAGAACATTTTTACTTGCAGGAAGTTGAGGAAGAATCAGTGGGCATTAAAAAGGCAGCTCCTGCACGAGGTACAAGTTCTAAGAGAAGTCGTGCAGCTGAAGTGCATAATCTATCTGAAAGGAGGCGAAGAGACAGGATCAATGAGAAGATGCGCGCATTACAAGAACTCATCCCAAATTGCAATAAGGTGGATAAAGCATCAATGCTGGATGAGGCAATTGAGTATCTTAAAACACTTCAACTCCAAGTTCAAATTATGTCAATGGGAGCTGGTTTATATGGGCCTCCAAATCCTATTATGTTACACCCAGGAATGCATCACATGCAGACACCACATATGGCTTCATTCTCACCCATAGGAATTGGCATGCAAATGGGTTATGGATTGAGCATGTCTGACATGAATAGTGGATCCCCTAAATTCCCAATGGTTCAGGTGCCCCAAATGCAAGGAACCCATTTCCCTGTTTTACATATGCCTGGAACCACTGCTGCTTTACATGGGATGCCAAGATCAAGTCCTCAAGCATTTGGGTTTCCTGTTCGGGGGCATTACATGCCAATGCCAATTGCTCCTGGAGTTTCTATGCCAGGAGGGCCCCTAATGAACCCTTCGACTTCAGGACGAAATGCCTTTGGAGCTGCAGGACTTGGGGAAACTGTGGATTCGGCTTCAGCCTCTAGTTTAAAGGATCCAATGCCAATTGTGAATTCGCAAGTTATGCCAAGCACAGGTGGCAGTAACTCCACAGTCCAGATGTCTACTCAGTGTGAAGGAACGAATGTTAGAATTGATCAGACAGTTCTAGTGCATACTAGCGGGCATACCTCCAATATTAATGACAGCGGAGCCACTAATCCTGGCAAAGAAGATAAACCTGTGATTGGTAAATCTCGTAATGACTGA 2535 0.4339 MIRWREQEDTLQRWRHKSAQSTGGAAAKDGYPYRVKDRTSAQDQLEALQVACSPVLSRIPPYSSPLSYLSRLLHLFQTHRRHGLQCLFSFPGKSFIMPLYELYRMTKAKFDSKEKDNTCATDQSSAPENDFFELVWENGQISMQGKSSRARKSPVHKSLPSHSLPSYSPRTGDKDVGFGIDTKMGKLGDLDSGLHEIPISVPSHEMNLSQDEDMIPWLNYPMDDSLQNEYSFDFPRDVSGVTVNEFPAASNNFALMDTRSNGNQICKDSHKSPVPGVSSSEQVNLTKGSSNGEVGTSRLKGNNNQLYPPSSQRCQTSFASISAKISDITENNTSNSILQAPCGEITQIPSASSDFCSLNMQKQDPLCPRNSSNMMNFSHFARPAAIVRANLQSISMMSGLSSARPESLGTRKKDVNASSSNPPESTLVDLNNQKNCQKLVIDPSKAELESANVKSLGQTADFAEQFDPSCKEDGAFKNDQVSNQVPAESGTKGRPVVEKSINPEVASSSICSGNGMKRGSDNANKNLKRRSQDTEDSECQSEQEHFYLQEVEEESVGIKKAAPARGTSSKRSRAAEVHNLSERRRRDRINEKMRALQELIPNCNKVDKASMLDEAIEYLKTLQLQVQIMSMGAGLYGPPNPIMLHPGMHHMQTPHMASFSPIGIGMQMGYGLSMSDMNSGSPKFPMVQVPQMQGTHFPVLHMPGTTAALHGMPRSSPQAFGFPVRGHYMPMPIAPGVSMPGGPLMNPSTSGRNAFGAAGLGETVDSASASSLKDPMPIVNSQVMPSTGGSNSTVQMSTQCEGTNVRIDQTVLVHTSGHTSNINDSGATNPGKEDKPVIGKSRND 844
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele06g0073 844 MobiDBLite consensus disorder prediction 143 173 - -
Lele06g0073 844 MobiDBLite consensus disorder prediction 401 429 - -
Lele06g0073 844 MobiDBLite consensus disorder prediction 502 582 - -
Lele06g0073 844 MobiDBLite consensus disorder prediction 817 844 - -
Lele06g0073 844 PANTHER TRANSCRIPTION FACTOR PIF3 97 797 IPR044273 GO:0003700|GO:0006355
Lele06g0073 844 MobiDBLite consensus disorder prediction 502 521 - -
Lele06g0073 844 MobiDBLite consensus disorder prediction 412 429 - -
Lele06g0073 844 CDD bHLH_AtPIF_like 573 635 - -
Lele06g0073 844 FunFam Basic helix-loop-helix transcription factor 568 631 - -
Lele06g0073 844 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 573 622 IPR011598 GO:0046983
Lele06g0073 844 MobiDBLite consensus disorder prediction 268 310 - -
Lele06g0073 844 Pfam Helix-loop-helix DNA-binding domain 577 623 IPR011598 GO:0046983
Lele06g0073 844 Gene3D - 568 631 IPR036638 GO:0046983
Lele06g0073 844 MobiDBLite consensus disorder prediction 522 559 - -
Lele06g0073 844 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 570 634 IPR036638 GO:0046983
Lele06g0073 844 SMART finulus 579 628 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele06g0073 Lele-ChrLele06 465716 474422 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele06g0073 97 650 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G09530 37.634 2.84e-69 236
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Lele06g0073 HLH 9.6e-14 No_clan