Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele06g0066 ATGGCAGAATCTGATTCAAGTGATTTGCTGCAAGACAAAGTTCATTCTATTACGATATCCAATTCTATTGCACTCTTGGCGGTTATAACAGTAGGGGCGTCAAAGCTAGGTAGGGTTTTTGGAATCACATCCAGGGTTTTGCCACCTCTCAATTTCCTGGTTCAAATGGATTATGGTTGGCAGGACACTGGTACTCATGACAGGAGGCAAATCACAAAGGGGAAGGCATCCCAGGAATCCTTTACTGAAGATTGGGCAGAGGATTTTCGATTACCTATCAATCATAGGCCAACAGAAAATGTTGATCTAGACAGTGTTGAACAAGCATCTCTGGACACACATTTAACATCTTCTAACATTGGATTTAAGCTACTTCAAAAGATGGGGTGGAAAGGAAAGGGTCTGGGGAAGAATGAGCAAGGAATTATTGAGCCAATAAAATCTGGTATCAGAGATCCCAGATTGGGTGTGGGTAAACAAGAAGAAGATGATTTTTTCACTGCTGAAGAAAACATCCAGCGAAAGAAACTTGATGTAGAGTTGGATGAGACAGAGGAAAATATGAGGAAACGAGAGGTTTTGGCTGAACGTGAGCAAAAAATTCAAACTGAAGTGAACGAAATCCGAAAGGTGTTTTTTTGTGAACTCTGCAACAAGCAATACAAATTGGCCATGGAATTTGAAGCACACTTGAGCTCATATGATCACAATCACAGGAAGCGTTTCAAAGAAATGAAGGATATGCATGGTAGTAGCAGCCGAGATGATAGGCAAAAAAGAGAGCAGCAGCGTCAAGAGAGGGAAATGGCTAAGTTTGCTCAAATGGCTGATGCTCAAAAGCAGCAACAGCTGCAACAACAAGAAGAATCTGGATCTGCTTTGGTTTCCTCTGAATCTAGAACTGCCACTGCATTTGCAGAACAGGATCAGCGGAAGACTTTGAAGTTTGGGTTTTCCTCCAAGGGAAGTGCTTCCAAGAGCTCATTCGGGGGTGCTGCAAAGAAGCAAAAAGGTGACATGTCTTCTATATTCAGTGCCGATGCTGATGAAGAATAA 1056 0.4223 MAESDSSDLLQDKVHSITISNSIALLAVITVGASKLGRVFGITSRVLPPLNFLVQMDYGWQDTGTHDRRQITKGKASQESFTEDWAEDFRLPINHRPTENVDLDSVEQASLDTHLTSSNIGFKLLQKMGWKGKGLGKNEQGIIEPIKSGIRDPRLGVGKQEEDDFFTAEENIQRKKLDVELDETEENMRKREVLAEREQKIQTEVNEIRKVFFCELCNKQYKLAMEFEAHLSSYDHNHRKRFKEMKDMHGSSSRDDRQKREQQRQEREMAKFAQMADAQKQQQLQQQEESGSALVSSESRTATAFAEQDQRKTLKFGFSSKGSASKSSFGGAAKKQKGDMSSIFSADADEE 351
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele06g0066 351 MobiDBLite consensus disorder prediction 245 351 - -
Lele06g0066 351 Pfam G-patch domain 118 158 IPR000467 GO:0003676
Lele06g0066 351 Pfam Zinc-finger double-stranded RNA-binding 212 239 IPR022755 -
Lele06g0066 351 ProSitePatterns Zinc finger C2H2 type domain signature. 214 236 IPR013087 -
Lele06g0066 351 ProSiteProfiles G-patch domain profile. 117 162 IPR000467 GO:0003676
Lele06g0066 351 PANTHER FINGER DOMAIN PROTEIN, PUTATIVE (AFU_ORTHOLOGUE AFUA_3G04180)-RELATED 59 351 - -
Lele06g0066 351 SMART G-patch_5 115 160 IPR000467 GO:0003676
Lele06g0066 351 Coils Coil 167 194 - -
Lele06g0066 351 MobiDBLite consensus disorder prediction 245 273 - -
Lele06g0066 351 MobiDBLite consensus disorder prediction 276 330 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele06g0066 Lele-ChrLele06 429905 437480 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele06g0066 62 351 C2H2 Transcription Factor Family AT5G26610 65.646 4.74e-121 349