Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele06g0059 ATGGGAGGAGGTGGAGCGACGAAGAACGCGGAGGCACAGTACTCGTCGGCGAAGATTTCTGTGTGGTGGGACATCGAGAACTGCCATGTCCCCAAGGGCTGCGATCCGCACGCAATCGCCCAGAACATCAGCTCGGCGCTGGTTCAGATGAATTATTGTGGGCCCGTTTCCATCTCCTCCTACGGCGATACTACTCGCATCACAGCTTCTGTACAGCACGCTCTCTCCAGTACCGGAATCTCCCTCAACCATGTCCCGGCTGGTGTTAAAGATGCTAGCGACAAAAAGATTCTTGTTGATATGCTGTTTTGGGCTGTGGATAATCCTGCACCTGCTAATTATCTATTAATTTCCGGTGATCGAGACTTCTCTAACGCACTGCATCAGTTGCGGATGAGGAGATATAATATCCTTCTTGCACAGCCTCAGAAAGCATCTGCACCCCTAGTTGCAGCTGCCAAGAGTGTGTGGCTTTGGAGTAGTCTTTTAGCTGGAGGACCTCCTCTAACAAATGGTGAATCACAACAATTTGGTAATAATAGCAACTTATCGAGTTCTGACACTTTACAAATCCCAGTCTCTAGTTCTGTTCAGACAAATCAGCAGAGGGATTCCTTTGCTGAAGTTCATGTAGGAAATCACAATCATAATCATAAATTTCCAAATGCTGGAAAGGGATTAGATTCTAGATACCAGGGTAAAACAAAGCGGAGAAGCCCTAGTCAACCAAATGGACCCAGACCATTGAACCAATCAGTTGGACTTCAAGAAAATCATAGCAGTATAAACTCTTTCCGACCTGGCAACTACAGTCCAAATGTTCCCCCAAATGGATCTGCTCCAAATTTTGTGCATGGCAGTCCAGGCCAGTTACGGAGCAATAGCAGCAATCTACCAGGCAATAGCCAAATGCCTTATTCACAGCCATTAAGACCTAACAGTTATTCGATGCAACCTGCTTTTGCACCTAACCATCAATATCCAACAAATACCCATTCTTTTGCAGCTCCAGCAGTGCCTCCTAGACCTGGTGGACCCAAGTTCACCTCAGGACCACTCACAAATGTGCCAGATATAGGTAATTTGAACATATCTGGATTTCCAAAACAGAATCATGCTCCTCATCCTGTAAGGTCAGTTGATGAACAAAGTGGACATACGGTTCAGAACAATCAACAATTATACCGTGCTCACTCTTTTGGTCCAGAATATCCACCTACATCTATGGCAGCAATGGGTAATAATAACCCTCCTGGTAATGGCATGTGGGGATCTTCAGGATGTCCTAAACCTTCTGAATATGTACAAGGGCTTATAGGGGTTGTTTTGCTTGCCTTGAACACATTAAAAAATGAAAAGATAATGCCAACTGAGGCAAATATAGCTGATTGCATCCGTTATGGAGATCCTAAACACCGCACCACTGATGTTAAGAAGGCTTTGGACAGCGCTATTGAACAACAGATGGTGGTCAAACAGAATTTAGGTGCTTTGCAATTGTATATTGGTAAGAATAGTAAACTTTGGAAGTGTGTAAATCCTAAAAGTGGTAATCCTAAACGACACTCGAAAGAAATATGGGATCAAATGCAAAAAATTTTAACCACTCCTTCTGGAAGACTCGCAATAATGGGTACTCAATGCAAGTATGAAGCAGGTACTGTGATAAAGAATATGTGCTTAAAAAATGTTTCTTTGGGAGATGTTCTTCAGATTTTGAACATGGTGATTGCTCATAAAAAATGGATCATGCACCGTCAGTCAGGATGGCAACCACTTACCATCACTCTACCTCAGGCAAACTCTGATTTAGGTGTCACATACGAAATAGATGATTTGGATAGTTCCTGA 1851 0.4349 MGGGGATKNAEAQYSSAKISVWWDIENCHVPKGCDPHAIAQNISSALVQMNYCGPVSISSYGDTTRITASVQHALSSTGISLNHVPAGVKDASDKKILVDMLFWAVDNPAPANYLLISGDRDFSNALHQLRMRRYNILLAQPQKASAPLVAAAKSVWLWSSLLAGGPPLTNGESQQFGNNSNLSSSDTLQIPVSSSVQTNQQRDSFAEVHVGNHNHNHKFPNAGKGLDSRYQGKTKRRSPSQPNGPRPLNQSVGLQENHSSINSFRPGNYSPNVPPNGSAPNFVHGSPGQLRSNSSNLPGNSQMPYSQPLRPNSYSMQPAFAPNHQYPTNTHSFAAPAVPPRPGGPKFTSGPLTNVPDIGNLNISGFPKQNHAPHPVRSVDEQSGHTVQNNQQLYRAHSFGPEYPPTSMAAMGNNNPPGNGMWGSSGCPKPSEYVQGLIGVVLLALNTLKNEKIMPTEANIADCIRYGDPKHRTTDVKKALDSAIEQQMVVKQNLGALQLYIGKNSKLWKCVNPKSGNPKRHSKEIWDQMQKILTTPSGRLAIMGTQCKYEAGTVIKNMCLKNVSLGDVLQILNMVIAHKKWIMHRQSGWQPLTITLPQANSDLGVTYEIDDLDSS 616
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele06g0059 616 MobiDBLite consensus disorder prediction 354 368 - -
Lele06g0059 616 MobiDBLite consensus disorder prediction 236 333 - -
Lele06g0059 616 CDD PIN_limkain_b1_N_like 18 142 - -
Lele06g0059 616 Pfam NYN domain 18 154 IPR021139 GO:0004540
Lele06g0059 616 PANTHER LIMKAIN B LKAP 14 492 IPR024768 GO:0005777|GO:0010468|GO:1903231
Lele06g0059 616 MobiDBLite consensus disorder prediction 212 387 - -
Lele06g0059 616 Gene3D - 9 161 - -
Lele06g0059 616 Pfam OST-HTH Associated domain 547 602 IPR025677 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele06g0059 Lele-ChrLele06 391977 394885 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele06g0059 10 201 C2H2 Transcription Factor Family AT5G61190 69.072 2.26e-83 280
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele05g0243 05 1358391 1361272 Lele06g0059 06 391977 394885 ECH
Lele06g0059 06 391977 394885 Lele06g0059 06 391977 394885 ECH
Lele06g0059 06 391977 394885 Lele07g0255 07 1391416 1394263 hybridization
Lele06g0059 06 391977 394885 Lele08g0059 08 364683 367553 hybridization