Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele06g0046 ATGGATTCTGTAAAGAAGTCATGCAGATGTAGCTGGTTAGCTGGCTGTTTAAATCCTGCCCCTAGCATCATAACTGTGGAGGTGGAGCGAAGCTATCATCCTCTGAAAGAGGGGAAAAGGAAAATGGGTTCTGACGGCAATTCAGGGCCAACTATCGAGATCAATGATCTGAAATTCACGTATCCTGGGATCGACGGCCATCCTCCGCCGGGTTCCACTCCTCTCATCCAAGATTTCTCTCTCGCCCTCAATTCCGGCGACCGCTGCCTTCTCGTCGGATCTAACGGCGCTGGCAAGACCACCATACTCAAGATCTTAGGAGGGAAGCACATGGTGGAACCAGGCATGGTTCGTGTACTTGGGAGATCAGCTTTTCATGACACCAGTTTAGTAGCTTCTGGCGATCTGTGTTATCTTGGTGGAGAGTGGAGACGAGATGTTGCTTTTGCAGGGTTTGAGGTTCCAATACAAATGGATGTTTCTGCAGAGAAACTGATATTTGGGGTAGGCGGGATTGATCCTGGAAGAAGAGCAGAGCTAATCAAGGTACTAGATATCAATCTCTCCTGGAGGATGCATAAAGTATCTGATGGTCAAAGAAGAAGAGTTCAAATTTGTATGGGTCTTCTCAAGCCATTCAAGGTTCTTCTTCTTGACGAGATAACAGTGGATCTTGATGTTCTAGCAAGGGCTGATCTTCTGAACTTTCTACGAAAGGAATGTGAAGAGAGGGTTGCTACAATTATCTATGCAACACATATATTTGACGGTCTTGAGAATTGGCCTACACACATAGTTTATGTAGCTCAGGGAAAGCTGCAACTAGCAATGCCCATCGATAAAGTCAAAGACATTAGCAAATTGTCACTGATGAGAACAGTTGAAAGCTGGTTGAGGAAAGAACGTGATGAAGAGAGGAAGAGAAGGAAAGAAAGGAAGGCAAAAGGTCTAGCGGAATTTGATAGGCAAGTTGAAGGAAGCCGGGTGACAGGGGATCCAGCTCGACTGCTGAATAATGGTTGGGCAGCAGGGCGACTGAATCCCACCATTGCTGGCGAGGAGAATTTTCTCTTCAGCTCAAACAGAGTGCTGAGGCAGTAG 1101 0.465 MDSVKKSCRCSWLAGCLNPAPSIITVEVERSYHPLKEGKRKMGSDGNSGPTIEINDLKFTYPGIDGHPPPGSTPLIQDFSLALNSGDRCLLVGSNGAGKTTILKILGGKHMVEPGMVRVLGRSAFHDTSLVASGDLCYLGGEWRRDVAFAGFEVPIQMDVSAEKLIFGVGGIDPGRRAELIKVLDINLSWRMHKVSDGQRRRVQICMGLLKPFKVLLLDEITVDLDVLARADLLNFLRKECEERVATIIYATHIFDGLENWPTHIVYVAQGKLQLAMPIDKVKDISKLSLMRTVESWLRKERDEERKRRKERKAKGLAEFDRQVEGSRVTGDPARLLNNGWAAGRLNPTIAGEENFLFSSNRVLRQ 366
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele06g0046 366 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 49 287 IPR027417 -
Lele06g0046 366 Pfam ABC transporter 77 222 IPR003439 GO:0005524
Lele06g0046 366 PANTHER SKFA PEPTIDE EXPORT ATP-BINDING PROTEIN SKFE 51 299 - -
Lele06g0046 366 Gene3D - 48 329 IPR027417 -
Lele06g0046 366 SMART AAA_5 85 272 IPR003593 -
Lele06g0046 366 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 52 295 IPR003439 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele06g0046 Lele-ChrLele06 315975 320694 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele06g0046 52 268 Calmodulin-binding Proteins AT2G36910 22.650 2.28e-08 54.3