Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele06g0040 ATGTCCGACAACGAGGATTGCCCGAACCAATATGGCGTCCTCCTCTACTGTAAGTATGCTCAAATTCCTAACCTCGATCACCTCCTCACTTTCTACGAGTCTAATTGCTCCTCCCTTGGCCTCCTTGGTCGCGTTCGTCTCTCTTCCCACGGTGTCAATGTCACGGTTGGTGGCAAGTTATCCTCTCTAGAAAGACACATTGAAACAGTCAAGGCCGATAGCTTATTTGAAGGGACTGATTTCAAGCTTGCTGCTTGTCATCAAGCATTAAACGACAATATTGCAAAAGAAAGCGGATTTACGTCTCTTTCAGTTCGAATTGTCAAGGAGCTGGTTACTCTTAGGTCTCATCCCTTGCTAAAACCACCAGAAATTTCAAACGCTGGAAGACATCTCTCTGCAGTTGAGTTTCATTCTCTCCTACAGAATGCTGCCAAGGAGAGTGCAGCAGATTGCCTTGTCTTACTTGATGCAAGGAATCTTTATGAGACAAGAATTGGGAAATTTCATGCACCAAATGTTCAAACTTTGGATCCACAAGTTAGACAATACAGTGATCTGCCATCATGGATAGATGGTAATCATGATCAATTGAAAGGGAAGCAAATCCTCATGTATTGCACTGGCGGAATCAGATGTGAAATGGCATCAGCATATATTAGGTCAAAAGGTTTGGGCTTTGAGAATGTGTTTCAGCTATTTGGAAAGAATTTTGTTTTTGATCATCGAATATCTGTTGGGAGCTCAGATGCAAACGTGATTGGTACCTGCCTTACTTGTGGGTGTTCGTGTGATGATTATTCTTCACGGAGCAGATGTAATTCTTGCAGAATGCTTGTTTTGGTCTGCAATAGTTGCCAGAATGAAGCTGCACCCTATGTTTGTGAGTTGTGCCAACAACAGGGCAAGGCTGCAAGGATGATGCAGCTAACCGAAGTTGGTGAAGCAGAAACACCAGTGCCAGATAAAGATGATGTCAGGTCGGCAAGAAAACTCAGAATCTTGTGCTTGCATGGATTTCGGCAGAATGCATCAGGTTTCAAAGGAAGAACAGCATCATTAGCGAAAAAAATAAAGAAAATTGCCGACTTATTTTTTGTAGATGCGCCTCATGAGTTGCCATATATTTATCAACCCCCAGTGTTGGAACAGCATACAAATTGTGCATCAACTTCGTTGCCCTCAAGTCCGCCTCCACCTTCGGAGAATTGTAAGAAGAAATTTGCATGGTTTGTGCCACCCAACTTTGACGGAGGAGGTAGAGCTGATTGGAAGGTATCCGATGGCCCATTTGATCCCCTTCAATACCAGCAGCAAACTGATGGACATGATATTTCACTAGCTCATTTGAAGGCCATGTTTGTTCAAGAAGGGCCTTTTGATGGAATATTGGGATTTTCACAGGGAGCAGCAATGGCTGCATTAATCTCTGCACAACAAGAGAAGCTTAAAGGTGAAATGGACTTCAGATTTGTTATATTGTGCTCAGGCTTTGTTGTCCATAGAAAGGAGATGGACTGCGAGTTGATCAAATGCCCTTCTCTTCACATTTATGGAAATGAACACGGCAATGACAGGCAGATAGCCAACCAAGATAGCAAGGAACTTGCTTCCCTGTATGACGGAAGTAGTTTGGTTACTGTTGAACATGATTGTGGTCATATAATTCCTACGCGGTCGCCGTACATCGATGTGATCAAGGACTTCCTAAATCGCTTTTTGCAATAG 1728 0.4323 MSDNEDCPNQYGVLLYCKYAQIPNLDHLLTFYESNCSSLGLLGRVRLSSHGVNVTVGGKLSSLERHIETVKADSLFEGTDFKLAACHQALNDNIAKESGFTSLSVRIVKELVTLRSHPLLKPPEISNAGRHLSAVEFHSLLQNAAKESAADCLVLLDARNLYETRIGKFHAPNVQTLDPQVRQYSDLPSWIDGNHDQLKGKQILMYCTGGIRCEMASAYIRSKGLGFENVFQLFGKNFVFDHRISVGSSDANVIGTCLTCGCSCDDYSSRSRCNSCRMLVLVCNSCQNEAAPYVCELCQQQGKAARMMQLTEVGEAETPVPDKDDVRSARKLRILCLHGFRQNASGFKGRTASLAKKIKKIADLFFVDAPHELPYIYQPPVLEQHTNCASTSLPSSPPPPSENCKKKFAWFVPPNFDGGGRADWKVSDGPFDPLQYQQQTDGHDISLAHLKAMFVQEGPFDGILGFSQGAAMAALISAQQEKLKGEMDFRFVILCSGFVVHRKEMDCELIKCPSLHIYGNEHGNDRQIANQDSKELASLYDGSSLVTVEHDCGHIIPTRSPYIDVIKDFLNRFLQ 575
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele06g0040 575 FunFam Rhodanese-like domain-containing protein 6 2 112 - -
Lele06g0040 575 Gene3D - 2 112 - -
Lele06g0040 575 Gene3D alpha/beta hydrolase 328 575 IPR029058 -
Lele06g0040 575 Pfam Rhodanase C-terminal 235 299 IPR022111 -
Lele06g0040 575 FunFam esterase OVCA2 isoform X6 328 575 - -
Lele06g0040 575 PANTHER THIOSULFATE SULFURTRANSFERASE/RHODANESE-LIKE DOMAIN-CONTAINING PROTEIN 2 5 573 IPR020936 -
Lele06g0040 575 ProSiteProfiles Rhodanese domain profile. 153 237 IPR001763 -
Lele06g0040 575 SUPERFAMILY Rhodanese/Cell cycle control phosphatase 106 240 IPR036873 -
Lele06g0040 575 SUPERFAMILY alpha/beta-Hydrolases 404 574 IPR029058 -
Lele06g0040 575 Pfam UPF0176 acylphosphatase like domain 13 110 IPR040503 -
Lele06g0040 575 Pfam Serine hydrolase (FSH1) 330 565 IPR005645 -
Lele06g0040 575 Gene3D - 121 258 IPR036873 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele06g0040 Lele-ChrLele06 293467 297507 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele06g0040 10 574 Sulfurtransferasese or Rhodanese AT1G09280 59.727 0.0 696